DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngB and CNGC6

DIOPT Version :10

Sequence 1:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_001323881.1 Gene:CNGC6 / 816931 AraportID:AT2G23980 Length:770 Species:Arabidopsis thaliana


Alignment Length:685 Identity:138/685 - (20%)
Similarity:252/685 - (36%) Gaps:197/685 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 NDERTLDPQ-------GKIYISWLCVVSLSFLYNAWVIPLRASFPFQTKENTNIWLACDFCADII 513
            ::::..|||       .|:::: .|::::|      |.||....||...:..        |..|.
plant    99 SEKKIFDPQDKFLLLCNKLFVA-SCILAVS------VDPLFLYLPFINDKAK--------CVGID 148

  Fly   514 YLLDVVFFKHRVM----YLF-------------------EGFWVKNKNLTRKNYMRKLQFKLDLL 555
            ..|.::....|.:    |||                   .|..|.:.....|.|::: .|.:|||
plant   149 RKLAIIVTTIRTVIDSFYLFHMALRFRTAYVAPSSRVFGRGELVIDPAQIAKRYLQQ-YFIIDLL 212

  Fly   556 ALLPL------ELLYFKLGTQAV----WLRF-------PRFFKI---------------QSFW-- 586
            ::||:      ..||...|...:    .||:       |||.::               ::.|  
plant   213 SVLPVPQIIVWRFLYTSRGANVLATKQALRYIVLVQYIPRFLRMYPLSSELKRTAGVFAETAWAG 277

  Fly   587 EVFRLLDRVISSPHFVRVAKTLTYMLYMIH------ITAALYY-------------AYSDYQGLG 632
            ..:.||..:::|...::.:.|:.|.....|      |..||:|             |..:.|...
plant   278 AAYYLLLYMLASHVSIQFSCTILYPFLCSHKFMCMQIVGALWYLLALERNNDCWSKACHNNQNCT 342

  Fly   633 QNRWVFSG----KGHP------------------------------YVR---------------- 647
            :| ::|.|    ||:.                              |:|                
plant   343 RN-FLFCGNQNMKGYAAWDNIKVSYLQLKCPVNVPEDEEPPFDFGIYLRALSSGIVSSKNFVSKY 406

  Fly   648 --CFAFATKTATSIGKNPKPER-QGEYVFMTVAWLMGVFVFALLIGQIRDIISTATRNKHEYRQL 709
              |..:..:..:::|:..:... .||.:|.....:.|:.:||||||.::..:.:.|....|.|..
plant   407 FFCLWWGLQNLSTLGQGLETSTYPGEVIFSITLAIAGLLLFALLIGNMQTYLQSLTIRLEEMRVK 471

  Fly   710 EDETLEYMRRLNLSQEVQSRVKMWFQFTWEQQRTLDESNILDALPINLKTDIAISVHIQTLSKVQ 774
            ..::.::|....|..|::.||:.:.|:.|.:.|.:||.|::..||.:|:.||...:.:..:.:|.
plant   472 RRDSEQWMHHRMLPPELRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVP 536

  Fly   775 LFADCEEALLRDLVLKLRAVTFLPGDFVCRKGEVGREMYIV---KLGQVQVMGGPSSDVVLATLT 836
            ||.:.:|.||..:..:|:...|....::.|:|:...||..:   :|..|...||.|.....:.|.
plant   537 LFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLK 601

  Fly   837 EGSVFGEISLL-------GINGADRRTADVRSKGYSNLFVLSKSDLNEVIAYY------------ 882
            ||...|:..|.       |.| ....|..|::......|.|...:|..|.:.:            
plant   602 EGDFCGDELLTWALDPKSGSN-LPSSTRTVKALTEVEAFALIADELKFVASQFRRLHSRQVQHTF 665

  Fly   883 -------PTAQAILKKRA--RQLMRKNAAREREEERERARSALQADVVIGNPKTPETAPKLLQTV 938
                   .|..|...:.|  |.:.||...:.|:||.|...:|  |.|:.|.      :|..::..
plant   666 RFYSQQWRTWAACFMQAAWRRYIKRKKLEQLRKEEEEEEAAA--ASVIAGG------SPYSIRAT 722

  Fly   939 IQALPFESPAVVLITRGSKRMRRKRQSVQMETIVE 973
            ..|..|.:.|:    |...:.|..:.::.:.:..|
plant   723 FLASKFAANAL----RSVHKNRTAKSTLLLSSTKE 753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngBNP_611607.2 PLN03192 411..>891 CDD:215625 119/599 (20%)
CAP_ED 775..889 CDD:237999 31/142 (22%)
CNGC6NP_001323881.1 PLN03192 161..>589 CDD:215625 86/429 (20%)
CAP_ED 537..668 CDD:237999 29/131 (22%)

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