DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngB and KCNH6

DIOPT Version :10

Sequence 1:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_110406.1 Gene:KCNH6 / 81033 HGNCID:18862 Length:994 Species:Homo sapiens


Alignment Length:743 Identity:165/743 - (22%)
Similarity:277/743 - (37%) Gaps:166/743 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   345 MNSDVDHRKPSSAGSLDSQGQQFLRDQVRHLVRRFTARANKVKSRIELPPTPSSSSTVSSPSPPP 409
            :.|:..|.:|...|....:|:.....|:......| ...|..|.|        ||||.......|
Human   154 LGSEGSHGRPGGPGPGTGRGKYRTISQIPQFTLNF-VEFNLEKHR--------SSSTTEIEIIAP 209

  Fly   410 TKSLHPS------------------PQHKVRLVPAGQSP--HRGRLFEADTPRSNVWLCSSLCGA 454
            .|.:..:                  |::|:      |:|  ||..:... :|...||        
Human   210 HKVVERTQNVTEKVTQVLSLGADVLPEYKL------QAPRIHRWTILHY-SPFKAVW-------- 259

  Fly   455 NNDERTLDPQGKIYISWLCVVSLSFLYNAWVIPLRASFPFQTKENTNIWLAC----------DFC 509
                           .||  :.|..:|.|...|..|:|....::.:... ||          |..
Human   260 ---------------DWL--ILLLVIYTAVFTPYSAAFLLSDQDESRRG-ACSYTCSPLTVVDLI 306

  Fly   510 ADIIYLLDVVFFKHRVMYLFEGFWVKNKNLTRKNYMRKLQ-------FKLDLLALLPLELLYFKL 567
            .||::::|:| ...|..|:       |.|....::.|::.       |.:|::|.:|.:||.|:.
Human   307 VDIMFVVDIV-INFRTTYV-------NTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFDLLIFRT 363

  Fly   568 GTQAV-----WLRFPRFFKIQSFWEVFRLLDRVISSPHFVRVAKTLTYMLYMIHITAALYYA--- 624
            |:...     .|:..|..::.   .|.|.|||.......|......|:.| :.|..|.::||   
Human   364 GSDETTTLIGLLKTARLLRLV---RVARKLDRYSEYGAAVLFLLMCTFAL-IAHWLACIWYAIGN 424

  Fly   625 ----YSDYQGLGQNRWVFS-----GKGH-------------PYVRCFAFATKTATSIG-KNPKPE 666
                |.::: :|   |:.|     ||.:             .||....|...:.||:| .|..|.
Human   425 VERPYLEHK-IG---WLDSLGVQLGKRYNGSDPASGPSVQDKYVTALYFTFSSLTSVGFGNVSPN 485

  Fly   667 RQGEYVFMTVAWLMGVFVFALLIGQIRDIISTATRNKHEYRQLEDETLEYMRRLNLSQEVQSRVK 731
            ...|.||.....|:|..::|.:.|.:..||.........|........|::|...:...::.|::
Human   486 TNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLE 550

  Fly   732 MWFQFTWEQQRTLDESNILDALPINLKTDIAISVHIQTLSKVQLFADCEEALLRDLVLKLRAVTF 796
            .:||..|.....:|.:.:|...|..|:.||.:.:|...|.....|:...:..||.|.:|.:....
Human   551 EYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAFSGAGKGCLRALAVKFKTTHA 615

  Fly   797 LPGDFVCRKGEVGREMYIVKLGQVQVMGGPSSDVVLATLTEGSVFGE-ISLLGINGADRRTADVR 860
            .|||.:...|:|...:|.:..|.::::   ..|||:|.|.:..:||| :||....|  :.:||||
Human   616 PPGDTLVHLGDVLSTLYFISRGSIEIL---RDDVVVAILGKNDIFGEPVSLHAQPG--KSSADVR 675

  Fly   861 SKGYSNLFVLSKSDLNEVIAYYPT-AQAILKKRARQLMRKNAAREREEERERA------RSALQA 918
            :..|.:|..:.::||.||:..||. |::...|.......::||........:|      :....:
Human   676 ALTYCDLHKIQRADLLEVLDMYPAFAESFWSKLEVTFNLRDAAGGLHSSPRQAPGSQDHQGFFLS 740

  Fly   919 DVVIGNPKTPETAPKLLQTVIQALPFESPAVVLITRGSKRMRRKRQSVQMETIVEPKMEVTGAAE 983
            |...|:|.  |..|:          |.|....|:..||:................|.:.::    
Human   741 DNQSGSPH--ELGPQ----------FPSKGYSLLGPGSQNSMGAGPCAPGHPDAAPPLSIS---- 789

  Fly   984 TQDQKGLKTGRCSPDLLSSIQQELKSKH 1011
              |..||     .|:||    ||:..:|
Human   790 --DASGL-----WPELL----QEMPPRH 806

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngBNP_611607.2 PLN03192 411..>891 CDD:215625 126/549 (23%)
CAP_ED 775..889 CDD:237999 36/115 (31%)
KCNH6NP_110406.1 PAS_9 38..132 CDD:463873
PLN03192 259..>698 CDD:215625 114/485 (24%)
Blue background indicates that the domain is not in the aligned region.

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