DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngB and cnga3a

DIOPT Version :10

Sequence 1:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster
Sequence 2:XP_005166141.1 Gene:cnga3a / 567242 ZFINID:ZDB-GENE-090611-2 Length:765 Species:Danio rerio


Alignment Length:801 Identity:223/801 - (27%)
Similarity:376/801 - (46%) Gaps:156/801 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 ATHALVKHILHHEKP------LVSPD----SVRRVLEQDSFEMVPLPGAVPEIVPDPIAIQRAEE 266
            |||.|.:.:   |:|      ...||    |.|....:.|..:...|....:..|.|:|:.....
Zfish    80 ATHRLHREV---ERPDSFLERFRGPDLKDISSRGSNARSSIGLPDRPHKRKKANPWPLAVYNMNN 141

  Fly   267 LAAATGQVVLPKEEEEEEKSSPLHQVESQPDVDEDEQDVQICYNESPELQNEDRNERTQRTPSIN 331
            ......:    ||:::||       ::...|..|:::|      |..|.::|.::|:.       
Zfish   142 CNNTDDK----KEDKKEE-------IKKDGDKKEEKKD------EKEEKKDEKKDEKK------- 182

  Fly   332 ESEIVAVDEPDTEMNSDVDHRKPSSAGSLDSQGQQFLRDQVRHLVRRFTARANKVKSRIELPPTP 396
                   ||.|.:.:...|.:|.........:.:...:|.         .:.:|.|.        
Zfish   183 -------DEKDEKKDEKKDEKKDEKKDEKKDEKKDDKKDD---------KKDDKKKD-------- 223

  Fly   397 SSSSTVSSPSPPPTKSLHPSPQHKVRLVPAGQSPHRGRLFEADTPRSNVWLCSSLCGANNDERTL 461
                     :|||.|                                .||:             :
Zfish   224 ---------APPPPK--------------------------------EVWI-------------M 234

  Fly   462 DPQGKIYISWLCVVSLSFLYNAWVIPLRASFPFQTKENTNIWLACDFCADIIYLLDVVFFKHRVM 526
            ||....|..||.:::....||..::..||.|.......|.:|:..|:.:|:||.:| .|.:.|..
Zfish   235 DPASDKYYRWLSIIAAPVFYNLMMLVTRACFNELQNTYTILWIVLDYTSDVIYYMD-TFVRSRTG 298

  Fly   527 YLFEGFWVKNKNLTRKNYMRKLQFKLDLLALLPLELLYFKLGTQAVWLRFPRFFKIQSFWEVFRL 591
            :|.:|..||:......||....|||.|:::::|.:|...|:|.....|||.|.||:...:|.|..
Zfish   299 FLEQGLLVKDSKKLINNYRTIPQFKYDMISMIPTDLFMLKVGFNNPELRFNRLFKMARLFEFFDR 363

  Fly   592 LDRVISSPHFVRVAKTLTYMLYMIHITAALYYAYSDYQGLGQNRWVFSGKGHP--------YVRC 648
            .:...:.|:..|::..:.|:|.:||..|.:::|.|...|.|.:.||:....||        |:.|
Zfish   364 TETRTNYPNIFRISNLVLYILVIIHWNACIFFAISKTIGFGTDTWVYPNISHPEYGRLARKYIYC 428

  Fly   649 FAFATKTATSIGKNPKPERQGEYVFMTVAWLMGVFVFALLIGQIRDIISTATRNKHEYRQLEDET 713
            ..::|.|.|:||:.|.|.|..||:|:.:.:|:||.:||.::|.:..:||....::.|::...|..
Zfish   429 LYWSTLTLTTIGETPPPVRDIEYLFVVMDFLIGVLIFATIVGNVGAMISNMNASRAEFQAKIDSI 493

  Fly   714 LEYMRRLNLSQEVQSRVKMWFQFTWEQQRTLDESNILDALPINLKTDIAISVHIQTLSKVQLFAD 778
            .:||:...:|:::::||..||.:.|.:::|.||..:|..||..||.:|||:||:.||.||::|.|
Zfish   494 KQYMQFRKVSKDLEARVIKWFDYLWTEKKTCDEKEVLKNLPDKLKAEIAINVHLDTLKKVRIFQD 558

  Fly   779 CEEALLRDLVLKLRAVTFLPGDFVCRKGEVGREMYIVKLGQVQVMG--GPSSDVVLATLTEGSVF 841
            ||..||.:|||||:...|.|||::|:||::||||||:|.|::.|:.  |.:..||   |::|:.|
Zfish   559 CEAGLLIELVLKLQPQVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVV---LSDGAYF 620

  Fly   842 GEISLLGINGA---DRRTADVRSKGYSNLFVLSKSDLNEVIAYYPTAQAILKKRARQLMRKN--- 900
            ||||:|||.|:   :||||::||.|||:||.|||.||.|.:..||.|:..|:::.:.::||:   
Zfish   621 GEISILGIKGSKAGNRRTANIRSVGYSDLFALSKDDLVEALTEYPDAKKALEEKGKAILRKDNLL 685

  Fly   901 -----AA----REREEERERARSALQADVVIGNPKTPETAPKLLQTVIQALPFESPAVVLITRGS 956
                 ||    ::.||:..|....|  |::.|         |..:.:.:...::......||...
Zfish   686 DEAVAAAGADPKDLEEKIHRLEGNL--DIMTG---------KFAKLMAEYTSYQGKIKQRITNME 739

  Fly   957 KRMRRKRQSVQMETIVEPKME 977
            .:::..|.. .:..::|.|.|
Zfish   740 NKVKTLRPE-DLSEVIEDKKE 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngBNP_611607.2 PLN03192 411..>891 CDD:215625 169/492 (34%)
CAP_ED 775..889 CDD:237999 61/118 (52%)
cnga3aXP_005166141.1 Ion_trans 241..483 CDD:459842 75/242 (31%)
CAP_ED 555..671 CDD:237999 61/118 (52%)
CLZ 671..740 CDD:465160 14/79 (18%)

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