DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngB and cngb3.1

DIOPT Version :10

Sequence 1:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster
Sequence 2:XP_068075500.2 Gene:cngb3.1 / 562675 ZFINID:ZDB-GENE-090611-1 Length:987 Species:Danio rerio


Alignment Length:791 Identity:245/791 - (30%)
Similarity:392/791 - (49%) Gaps:133/791 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 ILHHEKPLVSPDSVRRVLEQDSFEM-----------VPLPGAVPEIVPDPIAIQRAEELAAATGQ 273
            :...|||....|..::  |:...|.           .|.||:.|...|.| |...|...|.|:..
Zfish    33 VKQEEKPEPKKDEEKK--EEKKEEQKPTETAPASAPAPAPGSAPAPAPAP-APGSAPAPAPASAP 94

  Fly   274 VVLPKEEEEEEKSSPLHQVESQPDVDEDEQDVQICYNESPELQNEDRNERTQRTPSINESEIVA- 337
            ...|       .|:|.....|.|                              .|:...:...| 
Zfish    95 APAP-------ASAPAPAPASAP------------------------------APAPASAPAPAS 122

  Fly   338 VDEPDTEMNSDVDHRKPSSAGSLDSQGQ--------------QFLRDQVRHLVRRFTARANKVKS 388
            ...||....:|     |::.|: ::.|:              ::..||:|.:|::...|....|.
Zfish   123 APAPDPPKPAD-----PANPGA-ETAGEDGPPSPPTPPVVYYRYTDDQLRDIVKKMRERTELYKD 181

  Fly   389 RIELPPTPSSSSTVSSPSPPPTKS------LHPSPQHKVRLVPAGQSPHRG-------------- 433
            :|..|...|...|     ||.|..      :....:.:::...|.|.....              
Zfish   182 KIVDPYASSPERT-----PPVTPVYRKEDWIRKQEEERIKREEAEQKKKEDDAKRAAAKKEKEEK 241

  Fly   434 ------------------RLFEADTPRSNVWLCSSLCGANNDE------RTLDP-QGKIYISWLC 473
                              ...||..|:.......:|.....|:      .|:|| ..:.||.||.
Zfish   242 EKKEKEEKLKAEKEAADKEAAEAMFPKIKCTCIDTLLKPFEDKMDSYLGATIDPFTDRRYIKWLS 306

  Fly   474 VVSLSFLYNAWVIPLRASFPFQTKENTNIWLACDFCADIIYLLDVVFFKHRVMYLFEGFWVKNKN 538
            ||:::|.||.|:...|..||:.|......|:..||.||::.::|:..|:.|:.::..|..:|::.
Zfish   307 VVTVAFNYNVWLATARLCFPYHTPATIPFWILFDFLADLVNVIDITMFQPRLQFVKAGDIIKDRV 371

  Fly   539 LTRKNYMRKLQFKLDLLALLPLELLYFKLGTQAVWLRFPRFFKIQSFWEVFRLLDRVISSPHFVR 603
            .|::||....:|:.||::::|.:||.|:.|..: :.|..||.:.|||:|....|:.:::..:..|
Zfish   372 QTKQNYRESARFQTDLISIIPFDLLCFQFGFTS-FFRLNRFMRYQSFFEFSDRLESIMAKAYIWR 435

  Fly   604 VAKTLTYMLYMIHITAALYYAYSDYQGLGQNRWVFSGKGHPYVRCFAFATKTATSIGKNPKPERQ 668
            |.:|..|:||.:||.:.|||..|:|:|||.:||.:.|.|:.|:||:.|||:|..:||..|:|...
Zfish   436 VGRTTGYLLYCLHINSCLYYVASEYEGLGSSRWTYDGLGNAYLRCYYFATRTLITIGGLPEPHTL 500

  Fly   669 GEYVFMTVAWLMGVFVFALLIGQIRDIISTATRNKHEYRQLEDETLEYMRRLNLSQEVQSRVKMW 733
            .|.||..|.:..|||||:.||||:||:|..||..:..:|...|..:.||....:.:.|||||:.|
Zfish   501 FEIVFQLVNFFTGVFVFSSLIGQMRDVIGAATAGQTYFRASMDSCVAYMNTYTIPKLVQSRVRTW 565

  Fly   734 FQFTWEQQRTLDESNILDALPINLKTDIAISVHIQTLSKVQLFADCEEALLRDLVLKLRAVTFLP 798
            :.:||:.|..||||.:||.:|:.::|.||:.:::.|..|:.||..|:..:|.|::|:|:::.:||
Zfish   566 YNYTWDSQGMLDESELLDKMPLVMRTAIAVDINLATFQKIDLFKGCDNQMLVDMLLRLKSIVYLP 630

  Fly   799 GDFVCRKGEVGREMYIVKLGQVQVMGGPSSDVVLATLTEGSVFGEISLL--GINGADRRTADVRS 861
            |||||:||::||||||:|.|:|||:|||.:.:|..||..|.||||||||  ..:|.:||||:|.:
Zfish   631 GDFVCKKGDIGREMYIIKAGEVQVIGGPDNKIVFVTLKAGCVFGEISLLQSAKDGGNRRTANVAA 695

  Fly   862 KGYSNLFVLSKSDLNEVIAYYPTAQAILKKRARQLMR-KNAAREREEERERARSALQADVVIGNP 925
            .|::|||||.|.|||:::.:||.:|.:|.|:.|:||: |..|...::|.|:.:.     :.:..|
Zfish   696 HGFANLFVLDKKDLNDILIHYPESQKVLAKKGRKLMKAKGKAAPTKDEGEKKKG-----LALFGP 755

  Fly   926 KTPETAPKLLQ 936
            |.|  .||:|:
Zfish   756 KPP--TPKMLR 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngBNP_611607.2 PLN03192 411..>891 CDD:215625 189/526 (36%)
CAP_ED 775..889 CDD:237999 61/115 (53%)
cngb3.1XP_068075500.2 None

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