DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngB and for

DIOPT Version :10

Sequence 1:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_477487.1 Gene:for / 44817 FlyBaseID:FBgn0000721 Length:1088 Species:Drosophila melanogaster


Alignment Length:369 Identity:72/369 - (19%)
Similarity:139/369 - (37%) Gaps:102/369 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   712 ETLEYMRRLNLSQEVQSRVKMWFQFTW-------EQQRTLDESNILDALPINLKTDIAISVHIQT 769
            :..:..|.|.:|.|.||...:..:...       |:.|.|.::.|||       .|...::   .
  Fly   471 QNFQRQRALGISAEPQSESSLLLEHVSFPKYDKDERSRELIKAAILD-------NDFMKNL---D 525

  Fly   770 LSKVQLFADCEEALLRDLVLKLRAVTFLPGDFVCRKGEVGREMYIVKLGQVQVMGGPSSDVVLAT 834
            |::::...||           :..|.:...:.:.::|:||..:|:::.|:|:|   ......|:|
  Fly   526 LTQIREIVDC-----------MYPVKYPAKNLIIKEGDVGSIVYVMEDGRVEV---SREGKYLST 576

  Fly   835 LTEGSVFGEISLLGINGADRRTADVRSKGYSNLFVLSKSDLNEVIAYYPTAQAILKKRARQLMRK 899
            |:...|.||:::| .|  .:|||.:.:....||:.:.:.....:                 :||.
  Fly   577 LSGAKVLGELAIL-YN--CQRTATITAITECNLWAIERQCFQTI-----------------MMRT 621

  Fly   900 NAAREREEERERARSALQADVVIGNPKTPETAPKLLQTVIQALPFE-----------SPAVVLIT 953
            ...|:.|      .|.....|.|......:|..| :..|::...::           .....:|:
  Fly   622 GLIRQAE------YSDFLKSVPIFKDLAEDTLIK-ISDVLEETHYQRGDYIVRQGARGDTFFIIS 679

  Fly   954 RGSKRMRRKRQSVQMETIVEPKMEVTGAAETQDQKG-----LKTGR--C-SPD------------ 998
            :|..|:..|:|..|.|..:    .:.|..:...:|.     |:|..  | |.|            
  Fly   680 KGKVRVTIKQQDTQEEKFI----RMLGKGDFFGEKALQGDDLRTANIICESADGVSCLVIDRETF 740

  Fly   999 --LLSSIQQELKSKHKFINLTDSEKALISQSANNSLEDMKVVDL 1040
              |:|::.:   .||::    |.|.|:..:..|....|:.:.||
  Fly   741 NQLISNLDE---IKHRY----DDEGAMERRKINEEFRDINLTDL 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngBNP_611607.2 PLN03192 411..>891 CDD:215625 37/185 (20%)
CAP_ED 775..889 CDD:237999 23/113 (20%)
forNP_477487.1 DD_cGKI-alpha 385..432 CDD:213374
CAP_ED 520..629 CDD:237999 28/151 (19%)
CAP_ED 638..754 CDD:237999 22/123 (18%)
STKc_cGK 783..1043 CDD:270724
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.