DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngB and Hcn4

DIOPT Version :10

Sequence 1:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_001074661.1 Gene:Hcn4 / 330953 MGIID:1298209 Length:1201 Species:Mus musculus


Alignment Length:300 Identity:61/300 - (20%)
Similarity:83/300 - (27%) Gaps:120/300 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 GLVGLGRIGSAV----------AL-----RAKVFGFNVSFYDPYLPDGIEKSLGLNRVYTLQELL 223
            |..||  :|.||          ||     ||:.|....:..|.....|:           :|...
Mouse    24 GATGL--LGRAVYKEFKNNDWDALGCGYNRARPFFLKCNLLDEDAVRGV-----------IQRFQ 75

  Fly   224 FHSDCVSLHC-------TLNEHNHHLINE-----FTIKQMRPGAFLVNTARGGLVDDEALAVALK 276
            .|   |.:||       .:..|....:|.     .|:.:...|:||:..:...:.|         
Mouse    76 PH---VIVHCAAERRPDVVERHTEAAMNLNVHACATLAKEAGGSFLIYISTDYVFD--------- 128

  Fly   277 QGRIRAAALDVHENEPYNVFQGALKDAPNLL-----------------CTPHAAF---------- 314
             ||          |.||..     .||||.|                 | |.||.          
Mouse   129 -GR----------NPPYGE-----NDAPNPLNLYGKSKLEGEREILRHC-PGAAILRVPILFGEV 176

  Fly   315 --YSEAATTELREMAASEIRRAIIGNIP--------ECLRNCVN-KEYFLRSSTGGGAGGYS--- 365
              ..|:|.|.|.|..........|.:..        :..|.|.| .|..|:..:..|...||   
Mouse   177 EKVEESAVTVLFERVQEGAESCTIDHCQQRFPTYTNDVARVCRNMAERALQDQSLRGIFHYSAKE 241

  Fly   366 -------EAGINGGYYSGGLQQAHSTTPLEAPHSAGSHAP 398
                   ...|...:   .|..:|.....|.|..||:..|
Mouse   242 QMTKYEMTCAIADAF---NLPSSHLIPMTEQPAGAGAQRP 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngBNP_611607.2 PLN03192 411..>891 CDD:215625
CAP_ED 775..889 CDD:237999
Hcn4NP_001074661.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..183 40/200 (20%)
Involved in subunit assembly. /evidence=ECO:0000250 209..260 10/53 (19%)
Ion_trans_N 218..260 CDD:400630 9/44 (20%)
PLN03192 253..>740 CDD:215625 6/28 (21%)
CAP_ED 595..703 CDD:237999
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 804..902
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 914..1201
Blue background indicates that the domain is not in the aligned region.

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