DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngB and Kcnh2

DIOPT Version :10

Sequence 1:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_038597.2 Gene:Kcnh2 / 16511 MGIID:1341722 Length:1162 Species:Mus musculus


Alignment Length:1094 Identity:215/1094 - (19%)
Similarity:372/1094 - (34%) Gaps:329/1094 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 FCDTLERHAFMRNVINQQPESTRRYSTPGEKEAQVRRSLEEITKDLKEIEQFVSATEELMQREKE 145
            ||   |...:.|..:.|:|.:......|..:    ||:..:|             .:.|:..|:.
Mouse    48 FC---ELCGYSRAEVMQRPCTCDFLHGPRTQ----RRAAAQI-------------AQALLGAEER 92

  Fly   146 QEQMMYSNKENKC------PSPVKR-----VTYKINAYKAPPRRHRPGSPRFYHSRLYFRNGKIG 199
            :.::.:..|:..|      ..|||.     :.:.:| ::....:...|||               
Mouse    93 KVEIAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILN-FEVVMEKDMVGSP--------------- 141

  Fly   200 CVDSTEHQNNVGATHALVKHILHHEKPLVS-----------------------PDSVRRVLEQDS 241
                              .|..:|..|..|                       ..|||    ..|
Mouse   142 ------------------AHDTNHRGPSTSWLASGRAKTFRLKLPALLALTARESSVR----TGS 184

  Fly   242 FEMVPLPGAV---PEIVP-----DPIAIQRAEELAAATGQV--VLPKEEEE----EEKSSPLHQV 292
            ......||||   .::.|     :.:|:   :|::|....|  :.|.||..    ...:||:..:
Mouse   185 MRSAGAPGAVVVDVDLTPAAPSSESLAL---DEVSAMDNHVAGLGPAEERRALVGPGSASPVASI 246

  Fly   293 ESQPDVDEDEQDVQICYNESPELQ--NEDRN------ERT---------QRTPSINESEIV---A 337
            ...              :.||..|  |.|.:      .||         :|..|.::.|.:   |
Mouse   247 RGP--------------HPSPRAQSLNPDASGSSCSLARTRSRESCASVRRASSADDIEAMRAGA 297

  Fly   338 VDEPDTEMNSDVDHRKPSSAGSLDSQGQQFLRDQVRHLVRRFTARANKVKSRIELPPTPSSSSTV 402
            :..|....::...|  |..:|.|:|....   |.||:  |..:.......:.::|...|..:|..
Mouse   298 LPPPPRHASTGAMH--PLRSGLLNSTSDS---DLVRY--RTISKIPQITLNFVDLKGDPFLASPT 355

  Fly   403 SSP---SPPPTKSLHPSPQHKVRLVPAGQS--PHRGRLFEADTPRSNVWLCSSLCGANNDERTLD 462
            |..   :|...:..|...:...:::..|..  |.    ::...||.:.|             |:.
Mouse   356 SDREIIAPKIKERTHNVTEKVTQVLSLGADVLPE----YKLQAPRIHRW-------------TIL 403

  Fly   463 PQGKIYISWLCVVSLSFLYNAWVIPLRASFPFQTKEN----TNIWLAC------DFCADIIYLLD 517
            ........|..::.|..:|.|...|..|:|..:..|:    .:...||      |...||::::|
Mouse   404 HYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLKETEDGSQAPDCGYACQPLAVVDLIVDIMFIVD 468

  Fly   518 VVFFKHRVMYL-----------------FEGFWVKNKNLTRKNYMRKLQFKLDLLALLPLELLYF 565
            :: ...|..|:                 |:| |                |.:|::|.:|.:||.|
Mouse   469 IL-INFRTTYVNANEEVVSHPGRIAVHYFKG-W----------------FLIDMVAAIPFDLLIF 515

  Fly   566 KLGTQAV--WLRFPRFFKIQSFWEVFRLLDRVISSPHFVRVAKTLTYMLYMIHITAALYYAYSDY 628
            ..|::.:  .|:..|..::.   .|.|.|||.......|......|:.| :.|..|.::||..:.
Mouse   516 GSGSEELIGLLKTARLLRLV---RVARKLDRYSEYGAAVLFLLMCTFAL-IAHWLACIWYAIGNM 576

  Fly   629 Q------------GLGQ---NRWVFSGKGHP-----YVRCFAFATKTATSIG-KNPKPERQGEYV 672
            :            .||.   ..:..||.|.|     ||....|...:.||:| .|..|....|.:
Mouse   577 EQPHMDSHIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNSEKI 641

  Fly   673 FMTVAWLMGVFVFALLIGQIRDIISTATRNKHEYRQLEDETLEYMRRLNLSQEVQSRVKMWFQFT 737
            |.....|:|..::|.:.|.:..||.........|........|::|...:...::.|::.:||..
Mouse   642 FSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHA 706

  Fly   738 WEQQRTLDESNILDALPINLKTDIAISVHIQTLSKVQLFADCEEALLRDLVLKLRAVTFLPGDFV 802
            |.....:|.:.:|...|..|:.||.:.::...|...:.|....:..||.|.:|.:.....|||.:
Mouse   707 WSYTNGIDMNAVLKGFPECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTL 771

  Fly   803 CRKGEVGREMYIVKLGQVQVMGGPSSDVVLATLTEGSVFGE-ISLLGINGADRRTADVRSKGYSN 866
            ...|::...:|.:..|.::::.|   |||:|.|.:..:||| ::|....|  :...|||:..|.:
Mouse   772 VHAGDLLTALYFISRGSIEILRG---DVVVAILGKNDIFGEPLNLYARPG--KSNGDVRALTYCD 831

  Fly   867 LFVLSKSDLNEVIAYYP-------------------------TAQAILKKR-ARQLMRKNAARER 905
            |..:.:.||.||:..||                         ...|.|:.. .||..||.:.|.|
Mouse   832 LHKIHRDDLLEVLDMYPEFSDHFWSSLEITFNLRDTNMIPGSPGSAELESGFNRQRKRKLSFRRR 896

  Fly   906 ---EEERERARSAL-QADVVIG-------------------NPKTPETA----PKLLQTVIQALP 943
               :.|:....||| |....:|                   .|.:||::    |....:.::.:|
Mouse   897 TDKDTEQPGEVSALGQGPARVGPGPSCRGQPGGPWGESPSSGPSSPESSEDEGPGRSSSPLRLVP 961

  Fly   944 FESPAVVLITRGSKRMRRKRQSVQMETIVEPKMEVTGAAETQDQKGLKTGRCSP 997
            |.||                         .|..:..| .|...:.|.|:..|:|
Mouse   962 FSSP-------------------------RPPGDPPG-GEPLTEDGEKSDTCNP 989

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngBNP_611607.2 PLN03192 411..>891 CDD:215625 119/557 (21%)
CAP_ED 775..889 CDD:237999 34/139 (24%)
Kcnh2NP_038597.2 PRK13559 30..328 CDD:237427 61/359 (17%)
PAS_9 38..130 CDD:463873 18/102 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..316 16/98 (16%)
Ion_trans 411..670 CDD:459842 63/280 (23%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:Q63472 626..631 2/4 (50%)
CAP_ED 744..855 CDD:237999 33/115 (29%)
cNMP-binding domain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00060 744..844 30/104 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 873..991 29/143 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1125..1162
Blue background indicates that the domain is not in the aligned region.

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