DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngB and Hcn1

DIOPT Version :10

Sequence 1:NP_611607.2 Gene:CngB / 37479 FlyBaseID:FBgn0266346 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_034538.2 Gene:Hcn1 / 15165 MGIID:1096392 Length:910 Species:Mus musculus


Alignment Length:626 Identity:143/626 - (22%)
Similarity:267/626 - (42%) Gaps:88/626 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   461 LDPQGKIYISWLCVVSLSFLYNAWVIPLRASFPFQTKENTNIWLACDFCADIIYLLDVVF-FKHR 524
            :.|.......|..::.:..:.|..:||:  ...|.|::.|..|:..:..:|.::|||::. |:..
Mouse   124 IHPYSDFRFYWDLIMLIMMVGNLVIIPV--GITFFTEQTTTPWIIFNVASDTVFLLDLIMNFRTG 186

  Fly   525 VMYLFEGFWVKNKNLTRKNYMRKLQFKLDLLALLPLELLYF--------KLGTQAVWLRFPRFFK 581
            .:.......:.:..:.:.||: |..|.:|.::.:|::.::.        ::...|..||..||.|
Mouse   187 TVNEDSSEIILDPKVIKMNYL-KSWFVVDFISSIPVDYIFLIVEKGMDSEVYKTARALRIVRFTK 250

  Fly   582 IQSFWEVFRLLDRVISSPH---------------FVRVAKTLTYMLYMIHITAALYYAYSDYQGL 631
            |.|...:.| |.|:|...|               .||:...:..||.:.|....|.:.....|..
Mouse   251 ILSLLRLLR-LSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDF 314

  Fly   632 GQNRWVFS--------GKGHPYVRCFAFATKTATSIGKNPKPERQGEYVFMTVAWLMGVFVFALL 688
            ..:.||..        ||.:.|....|.:.......|.. .|....:.....::.::|...:|:.
Mouse   315 PPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQ-APVSMSDLWITMLSMIVGATCYAMF 378

  Fly   689 IGQIRDIISTATRNKHEYRQLEDETLEYMRRLNLSQEVQSRVKMWFQFTWEQQRTLDESNILDAL 753
            :|....:|.:...::.:|::...:..:||....|..:::.::..:::..: |.:..||.|||..|
Mouse   379 VGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRY-QGKIFDEENILSEL 442

  Fly   754 PINLKTDIAISVHIQTLSKVQLFADCEEALLRDLVLKLRAVTFLPGDFVCRKGEVGREMYIVKLG 818
            ...|:.:|......:.::.:.|||:.:...:..::.|||...|.|||::.|:|.||::||.::.|
Mouse   443 NDPLREEIVNFNCRKLVATMPLFANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHG 507

  Fly   819 QVQVMGGPSSDVVLATLTEGSVFGEISLLGINGADRRTADVRSKGYSNLFVLSKSDLNEVIAYYP 883
            ...|:...|.::   .||:||.||||.||   ...||||.||:..|..|:.||..:.|||:..||
Mouse   508 VAGVITKSSKEM---KLTDGSYFGEICLL---TKGRRTASVRADTYCRLYSLSVDNFNEVLEEYP 566

  Fly   884 TAQAILKKRARQLMRK---NAAREREEERERARSAL----QADVVIG--NPKTPETAPKLL---Q 936
                        :||:   ..|.:|.:...:..|.|    |.|:..|  |.:..|...:::   :
Mouse   567 ------------MMRRAFETVAIDRLDRIGKKNSILLQKFQKDLNTGVFNNQENEILKQIVKHDR 619

  Fly   937 TVIQAL-PFESPAVVLI------TRGSKRMRRKRQSVQMETIVEPKMEVTGAAETQDQK------ 988
            .::||: |...|.:..:      |..:.|||.:...|...|.:......:.:..||..:      
Mouse   620 EMVQAIPPINYPQMTALNCTSSTTTPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAILS 684

  Fly   989 --GLKTGRCSPDLLSSIQQELKSK-HKFINLTDSEKALISQ 1026
              ...|..|||    .||..|.:: ..:.:.|.|:.:|:.|
Mouse   685 PCSYTTAVCSP----PIQSPLATRTFHYASPTASQLSLMQQ 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngBNP_611607.2 PLN03192 411..>891 CDD:215625 109/461 (24%)
CAP_ED 775..889 CDD:237999 44/113 (39%)
Hcn1NP_034538.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..75
Ion_trans_N 87..129 CDD:400630 1/4 (25%)
PLN03192 122..>609 CDD:215625 119/508 (23%)
Selectivity filter. /evidence=ECO:0000305|PubMed:12089064 347..351 0/3 (0%)
CAP_ED 464..572 CDD:237999 46/125 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 634..681 8/46 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 771..791
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 865..910
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.