DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10307 and lrrc47

DIOPT Version :10

Sequence 1:NP_611605.1 Gene:CG10307 / 37477 FlyBaseID:FBgn0034655 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001103842.1 Gene:lrrc47 / 553404 ZFINID:ZDB-GENE-060503-289 Length:565 Species:Danio rerio


Alignment Length:254 Identity:79/254 - (31%)
Similarity:117/254 - (46%) Gaps:41/254 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEKVCQFFRNNYVLANCEDAIYKK----------AFSLNLSHY-QISDVPGI------IEKCETL 48
            :||..:..|...||..  .|:.||          .:||:|.:| ::|..|.:      |.....|
Zfish    14 IEKAEKENRRELVLQG--SAVDKKIQSSGGLHAGLYSLSLLNYLEVSQCPSLHEIHENIRNLSHL 76

  Fly    49 MKLFLNQNKLTKIPSSIGSLMRLQVLTLDYNKLDEFPLCICRLVRLKFLNISCNNISSLPPELGY 113
            ..|.|.:||||.:|.|||.|..::||.|..|:|...|..||.|..|..||:|||::::||..|..
Zfish    77 QSLILCRNKLTSVPKSIGHLKAVKVLDLSVNQLQALPEEICALTELNTLNVSCNSLTALPDGLSK 141

  Fly   114 LTQLETFWCNNTGLLELPNEIRNCEHLETLG---VRGNPLKKLPDAIGALSSLRWLTAEGCELSE 175
            ..:|.:...:...|..||.::. |..||.|.   ...|.:::|...|..|.||:.|.....:|.|
Zfish   142 CVKLASINVSKNELSRLPEDLW-CSGLELLSSIIASENAIEELSSEIQNLPSLKVLDLSNNKLQE 205

  Fly   176 VPLTMALLGNLVHLNLKGNRL--RRLPRMLMAMQKLRFAFLNENCIDEMPTRSQLEELR 232
            :|..:|....|...|.|||:|  :||.:|                ::..||:|.|:.||
Zfish   206 LPAELADCPKLKETNFKGNKLKDKRLEKM----------------VNGCPTKSVLDYLR 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10307NP_611605.1 leucine-rich repeat 27..44 CDD:275380 7/23 (30%)
LRR <39..>276 CDD:443914 66/205 (32%)
leucine-rich repeat 48..70 CDD:275380 12/21 (57%)
leucine-rich repeat 71..93 CDD:275380 9/21 (43%)
leucine-rich repeat 94..116 CDD:275380 9/21 (43%)
leucine-rich repeat 117..139 CDD:275380 5/21 (24%)
leucine-rich repeat 140..162 CDD:275380 7/24 (29%)
leucine-rich repeat 163..185 CDD:275380 6/21 (29%)
leucine-rich repeat 186..208 CDD:275380 9/23 (39%)
leucine-rich repeat 209..233 CDD:275380 6/24 (25%)
lrrc47NP_001103842.1 LRR <63..>233 CDD:443914 58/170 (34%)
leucine-rich repeat 76..98 CDD:275380 12/21 (57%)
leucine-rich repeat 99..121 CDD:275380 9/21 (43%)
leucine-rich repeat 122..144 CDD:275380 9/21 (43%)
leucine-rich repeat 145..169 CDD:275380 6/24 (25%)
leucine-rich repeat 170..192 CDD:275380 5/21 (24%)
leucine-rich repeat 193..215 CDD:275380 6/21 (29%)
PLN02265 301..>556 CDD:215149
Blue background indicates that the domain is not in the aligned region.

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