Protein Alignment CG10307 and f-cup

DIOPT Version :10

• Sequence 1: NP_611605.1
• Gene: CG10307 / 37477
• FlyBaseID: FBgn0034655
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_001262544.1
• Gene: f-cup / 41677
• FlyBaseID: FBgn0028487
• Length: 802
• Species: Drosophila melanogaster
• Alignment Length: 358
• Identity: 92/358 - (25%)
• Similarity: 145/358 - (40%)
• Gaps: 70/358 - (19%)

  Fly    18 EDAIYKKA--FSLNLSHYQISDVPGIIEKCETLMKLFLNQNKLTKIPSSIGSLMRLQVLTLDYNK 80
            |||.:.:.  .:|:||...::.:...||..::|..|.|:.|.|.::|..||.|.:|..|.:.:||
  Fly   149 EDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNK 213

  Fly    81 LDEFPLCICRLVRLKFLNISC-----------------------NNISSLPPELGYLTQLETFWC 122
            |.:.|..:..|..|:.||||.                       |||.|||..:|:|.:|.....
  Fly   214 LSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLL 278

  Fly   123 NNTGLLELPNEIRNCEHLETLGVRGNPLKKLPDAIGALSSLRWLTAEGCELSEVP---------- 177
            ....:.|||.::.|...|:.:.:..|.|..||:.:|.|..|..|..:..::.|:|
  Fly   279 PYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDILELPEFEGNEALNE 343

  Fly   178 ----------LTMALLGNLVH---LNLKGNRLRRLPRMLMAMQKLRFAFLNENCIDEMPTRSQLE 229
                      :..|:..||.|   |:|:.|::..||..|..::.|....::.|.|..:|.  .|.
  Fly   344 LHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPV--TLS 406

  Fly   230 ELRTLHMLNLSKNPI-SLHRDLQLMALRQTNLYVELPSDPANICDGLASRASLNAQEQQEDQARG 293
            .|..|..|.:..||| ::.||:             |......|...|..||...|:|:      |
  Fly   407 SLAHLISLQVEGNPIKTIRRDI-------------LQCGTTRILKTLHDRAVAKAKEE------G 452

  Fly   294 AGQDLDSSDWANSVRTSELDTTDESALENNIED 326
            .|.|..|:....||........|:..:..|..|
  Fly   453 GGVDDASTSAGISVTRLRGGQMDDGDIPGNFPD 485

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG10307	NP_611605.1	leucine-rich repeat	27..44	CDD:275380	4/16 (25%)
		LRR	<39..>276	CDD:443914	72/283 (25%)
		leucine-rich repeat	48..70	CDD:275380	9/21 (43%)
		leucine-rich repeat	71..93	CDD:275380	7/21 (33%)
		leucine-rich repeat	94..116	CDD:275380	13/44 (30%)
		leucine-rich repeat	117..139	CDD:275380	5/21 (24%)
		leucine-rich repeat	140..162	CDD:275380	7/21 (33%)
		leucine-rich repeat	163..185	CDD:275380	5/41 (12%)
		leucine-rich repeat	186..208	CDD:275380	8/24 (33%)
		leucine-rich repeat	209..233	CDD:275380	6/23 (26%)
f-cup	NP_001262544.1	LRR	98..428	CDD:443914	75/280 (27%)
		leucine-rich repeat	111..140	CDD:275380
		leucine-rich repeat	158..180	CDD:275380	5/21 (24%)
		leucine-rich repeat	181..203	CDD:275380	9/21 (43%)
		leucine-rich repeat	204..226	CDD:275380	7/21 (33%)
		leucine-rich repeat	227..249	CDD:275380	5/21 (24%)
		leucine-rich repeat	250..272	CDD:275380	8/21 (38%)
		leucine-rich repeat	273..295	CDD:275380	5/21 (24%)
		leucine-rich repeat	296..318	CDD:275380	7/21 (33%)
		leucine-rich repeat	319..340	CDD:275380	4/20 (20%)
		leucine-rich repeat	341..364	CDD:275380	3/22 (14%)
		leucine-rich repeat	389..410	CDD:275380	5/22 (23%)
		leucine-rich repeat	411..430	CDD:275380	7/31 (23%)
		leucine-rich repeat	627..650	CDD:275380
		LRR	<629..>778	CDD:443914
		leucine-rich repeat	651..669	CDD:275380
		leucine-rich repeat	697..719	CDD:275380
		leucine-rich repeat	720..743	CDD:275380
		leucine-rich repeat	744..766	CDD:275380