DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10307 and Y54E10A.6

DIOPT Version :10

Sequence 1:NP_611605.1 Gene:CG10307 / 37477 FlyBaseID:FBgn0034655 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001380012.1 Gene:Y54E10A.6 / 171890 WormBaseID:WBGene00021828 Length:507 Species:Caenorhabditis elegans


Alignment Length:338 Identity:81/338 - (23%)
Similarity:130/338 - (38%) Gaps:87/338 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DAIYKKAFSLNLSHYQISDV--------PGIIEKCETLMKLFLNQNKLTKIPSSIGSLMRLQVLT 75
            :||....|.:.:.:.:|..|        ..:.|....|..|.|....|..:.|||.|...|..|.
 Worm    10 EAIENNRFEIVIKNVRIDSVTEAANLSQKRVFESMSQLNLLSLTGCSLHNLSSSIRSCSNLMHLV 74

  Fly    76 LDYNKLDEFPLCICRLVRLKFLNISCNNISSLPPELGYLTQLETFWCNNTGLLELPNEIRNCEHL 140
            |..|.|.:.|.....|.:|||:::|.|::.:||.                       .|..||:|
 Worm    75 LPKNDLKQLPDVFDCLPKLKFMDLSHNHLDALPA-----------------------SISKCENL 116

  Fly   141 ETLGVRGNPLKK--LPDAIGALSSLRWLTAEGCELSEVPLTMA---LLGNLVHLNLKGNRLRRLP 200
            |:|.:..|.|.:  .|| |..||:|....|....:|::|.::.   |...|..:.|..|.:..:|
 Worm   117 ESLILNNNRLNESSFPD-ISNLSNLHIFDAAHNTISKIPASLTSHNLSAKLHTIILSHNSIEVIP 180

  Fly   201 RMLMAMQKLRFAFLNENCIDEMPTRSQLEELRTLHMLNLSKNPISLHRDLQLMALRQTNLYVELP 265
            ..|..:::|:...::||.:.::|  |.:..|..|.:|::|||..|..|            :.:|.
 Worm   181 DSLSNLKQLKELKIDENKLKDVP--SVIAHLPKLKVLDISKNCFSESR------------FQKLA 231

  Fly   266 SDPANICDGLASRASLNA--------------QEQQEDQARGAGQDLDSSDWANSVRTSELDTTD 316
            :|         .|..|||              .|:|:........|....|...:|||       
 Worm   232 ND---------KRGKLNAVIALAQKIGKPIGNSEEQKKAPESGSPDFPVPDAPLTVRT------- 280

  Fly   317 ESALENNIEDLSV 329
                  .||:|:|
 Worm   281 ------GIENLTV 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10307NP_611605.1 leucine-rich repeat 27..44 CDD:275380 2/24 (8%)
LRR <39..>276 CDD:443914 61/241 (25%)
leucine-rich repeat 48..70 CDD:275380 8/21 (38%)
leucine-rich repeat 71..93 CDD:275380 7/21 (33%)
leucine-rich repeat 94..116 CDD:275380 7/21 (33%)
leucine-rich repeat 117..139 CDD:275380 2/21 (10%)
leucine-rich repeat 140..162 CDD:275380 9/23 (39%)
leucine-rich repeat 163..185 CDD:275380 5/24 (21%)
leucine-rich repeat 186..208 CDD:275380 5/21 (24%)
leucine-rich repeat 209..233 CDD:275380 6/23 (26%)
Y54E10A.6NP_001380012.1 LRR <34..>234 CDD:443914 61/246 (25%)
leucine-rich repeat 47..69 CDD:275380 8/21 (38%)
leucine-rich repeat 70..92 CDD:275380 7/21 (33%)
leucine-rich repeat 93..115 CDD:275380 9/44 (20%)
leucine-rich repeat 116..139 CDD:275380 9/23 (39%)
leucine-rich repeat 140..164 CDD:275380 5/23 (22%)
leucine-rich repeat 166..188 CDD:275380 5/21 (24%)
leucine-rich repeat 189..211 CDD:275380 6/23 (26%)
PLN02265 266..>495 CDD:215149 9/35 (26%)

Return to query results.
Submit another query.