DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbp and TBP

DIOPT Version :9

Sequence 1:NP_523805.1 Gene:Tbp / 37476 FlyBaseID:FBgn0003687 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_003185.1 Gene:TBP / 6908 HGNCID:11588 Length:339 Species:Homo sapiens


Alignment Length:373 Identity:215/373 - (57%)
Similarity:235/373 - (63%) Gaps:58/373 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDQMLSPNFSIPSIGTPLHQMEADQQIVANP--VYHPPAVSQPDSLMPAP----GSSSVQHQQQQ 59
            |||    |.|:|    |..|..|..|....|  ....|.:.....|.|.|    .|.|:..:||:
Human     1 MDQ----NNSLP----PYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQR 57

  Fly    60 QQSDASGGSGLFGHEPSLPLAHKQMQSYQPSASYQQQQQQQQLQSQAPGGGGSTPQSMMQPQTPQ 124
            ||.                  .:|.|..|.....||||||||.|.|         |...|.|..|
Human    58 QQQ------------------QQQQQQQQQQQQQQQQQQQQQQQQQ---------QQQQQQQQQQ 95

  Fly   125 SMMAHMMPMSERSVGGSGAGGGGDALSNIHQT----------------MGPSTPMTPATPGSADP 173
            ::.|..:..|.......|..|....|.: .||                |.|.||:|||||.|...
Human    96 AVAAAAVQQSTSQQATQGTSGQAPQLFH-SQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESS 159

  Fly   174 GIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 238
            |||||||||||||||.||||||.|||.||||||||||||||||||||||||||||||||||||||
Human   160 GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 224

  Fly   239 KSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCNFSSYEPELFP 303
            |||:.||||||||||::||||||||||||||||||||||||||||||||||||..||||||||||
Human   225 KSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFP 289

  Fly   304 GLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKFKK 351
            ||||||::|||||||||||||||||||||.|||:||:.|:||||.|:|
Human   290 GLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbpNP_523805.1 PLN00062 176..351 CDD:177693 157/174 (90%)
TBP_eukaryotes 176..349 CDD:239952 156/172 (91%)
TBPNP_003185.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 10/27 (37%)
polyglutamine repeat 58..95 18/63 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..159 10/31 (32%)
PLN00062 162..338 CDD:177693 158/176 (90%)
Repetitive region 165..241 70/75 (93%)
Repetitive region 255..332 67/76 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 151 1.000 Domainoid score I4353
eggNOG 1 0.900 - - E1_COG2101
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 359 1.000 Inparanoid score I2225
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1219067at2759
OrthoFinder 1 1.000 - - FOG0001202
OrthoInspector 1 1.000 - - otm41205
orthoMCL 1 0.900 - - OOG6_100597
Panther 1 1.100 - - O PTHR10126
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1482
SonicParanoid 1 1.000 - - X1201
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.860

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