DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tbp and tbpl2

DIOPT Version :9

Sequence 1:NP_523805.1 Gene:Tbp / 37476 FlyBaseID:FBgn0003687 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001017309.1 Gene:tbpl2 / 550063 XenbaseID:XB-GENE-876138 Length:322 Species:Xenopus tropicalis


Alignment Length:348 Identity:201/348 - (57%)
Similarity:232/348 - (66%) Gaps:52/348 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LHQMEADQQIVANPVYHPPAVSQPD-SLMPAPGS--SSVQHQQQQQQSDASGGSGLFGHEPSLPL 79
            |.|.:|:..:.::...:.|.....| ::.|.||:  ||...|.::..:|.|          |:.|
 Frog    11 LDQCDAEDVLASSAHMYTPMTPYDDLAIQPLPGTSYSSALEQSKELSTDFS----------SVDL 65

  Fly    80 AHKQMQSYQPSASYQ--QQQQQQQLQSQA---PGGGGSTPQSMMQPQTPQSM------MAHMMPM 133
                  |:.|....|  :.||:||..||:   ..|......::.||.||...      ..::.||
 Frog    66 ------SFLPDDLNQENEDQQEQQTSSQSLEQDSGICLDASNLSQPFTPSECRDASQDSTNLCPM 124

  Fly   134 SERSVGGSGAGGGGDALSNIHQTMGPSTPMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIA 198
                                  .:.|.|||||.||.:...|||||||||||||||.|||||||||
 Frog   125 ----------------------PITPMTPMTPMTPVAESSGIVPQLQNIVSTVNLACKLDLKKIA 167

  Fly   199 LHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGFPAK 263
            |||||||||||||||||||||||||||||||||||||||||||:.||||||||||::||||||||
 Frog   168 LHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAK 232

  Fly   264 FLDFKIQNMVGSCDVKFPIRLEGLVLTHCNFSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTG 328
            |||||||||||||||:||||||||||||..|||||||||||||||||:|||||||||||||||||
 Frog   233 FLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 297

  Fly   329 AKVRQEIYDAFDKIFPILKKFKK 351
            ||.|.|||:||:.|:||||.|||
 Frog   298 AKERSEIYEAFENIYPILKGFKK 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TbpNP_523805.1 PLN00062 176..351 CDD:177693 158/174 (91%)
TBP_eukaryotes 176..349 CDD:239952 157/172 (91%)
tbpl2NP_001017309.1 PLN00062 145..321 CDD:177693 160/176 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 151 1.000 Domainoid score I4304
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 349 1.000 Inparanoid score I2231
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1219067at2759
OrthoFinder 1 1.000 - - FOG0001202
OrthoInspector 1 1.000 - - otm48419
Panther 1 1.100 - - LDO PTHR10126
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1482
SonicParanoid 1 1.000 - - X1201
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.100

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