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Protein Alignment stum and Stum
DIOPT Version :9
Sequence 1: | NP_001261125.2 |
Gene: | stum / 37473 |
FlyBaseID: | FBgn0050263 |
Length: | 1870 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_001067525.1 |
Gene: | Stum / 689499 |
RGDID: | 1592263 |
Length: | 141 |
Species: | Rattus norvegicus |
Alignment Length: | 130 |
Identity: | 38/130 - (29%) |
Similarity: | 55/130 - (42%) |
Gaps: | 18/130 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 1708 KRRESNARRQSIRAPPP-SEDTRKKLHVDLVEYSSKMKGAIPVLPLYLAWFCAFCNVVFPGLGTL 1771
|..|:.|...::.|..| ...:...:.|.:.|....::.|||.:|..:|..|.|.|...|||||.
Rat 6 KDAETAAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFPVAVICLFLNTFVPGLGTF 70
Fly 1772 LSGLFCLCVGIPRFSQFDSARARIGS------FIINIIVAVSQFFCVLFCFVGWGWSIWWGTIML 1830
:|....|| .||..:.. |.:||..|:.|....: ..|||..||:||..|:
Rat 71 VSAFTVLC----------GARTDLPDRHVCCVFWLNIAAALIQVLTAI-VMVGWIMSIFWGMDMV 124
Fly 1831 1830
Rat 125 124
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
stum | NP_001261125.2 |
Spec3 |
1745..1833 |
CDD:292423 |
31/92 (34%) |
Stum | XP_001067525.1 |
Spec3 |
44..127 |
CDD:406276 |
31/92 (34%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166353064 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0006255 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto96296 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_107069 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR21676 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.840 |
|
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