DRSC/TRiP Functional Genomics Resources

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Protein Alignment stum and Stum

DIOPT Version :10

Sequence 1:NP_611603.3 Gene:stum / 37473 FlyBaseID:FBgn0050263 Length:1870 Species:Drosophila melanogaster
Sequence 2:NP_001074696.1 Gene:Stum / 381310 MGIID:2138735 Length:141 Species:Mus musculus


Alignment Length:130 Identity:38/130 - (29%)
Similarity:55/130 - (42%) Gaps:18/130 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1708 KRRESNARRQSIRAPPP-SEDTRKKLHVDLVEYSSKMKGAIPVLPLYLAWFCAFCNVVFPGLGTL 1771
            |..|:.|...::.|..| ...:...:.|.:.|....::.|||.:|..:|..|.|.|...|||||.
Mouse     6 KDAETAAAAAAVAAADPRGASSSSGVVVQVREKKGPLRAAIPYMPFPVAVICLFLNTFVPGLGTF 70

  Fly  1772 LSGLFCLCVGIPRFSQFDSARARIGS------FIINIIVAVSQFFCVLFCFVGWGWSIWWGTIML 1830
            :|....||          .||..:..      |.:||..|:.|....: ..|||..||:||..|:
Mouse    71 VSAFTVLC----------GARTDLPDRHVCCVFWLNIAAALIQVLTAI-VMVGWIMSIFWGMDMV 124

  Fly  1831  1830
            Mouse   125  124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stumNP_611603.3 KAR9 <661..919 CDD:430088
Herpes_BLLF1 <1064..1396 CDD:282904
Spec3 1745..1833 CDD:464875 31/92 (34%)
StumNP_001074696.1 Spec3 44..127 CDD:464875 31/92 (34%)
Blue background indicates that the domain is not in the aligned region.

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