DRSC/TRiP Functional Genomics Resources

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Protein Alignment NC2alpha and NF-YC3

DIOPT Version :10

Sequence 1:NP_611601.2 Gene:NC2alpha / 37471 FlyBaseID:FBgn0034650 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_175880.1 Gene:NF-YC3 / 841922 AraportID:AT1G54830 Length:217 Species:Arabidopsis thaliana


Alignment Length:122 Identity:33/122 - (27%)
Similarity:55/122 - (45%) Gaps:10/122 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NARFPAGRIKKIMQSDEEIGKVAQAVPVIISRTLELFVESLLTKTLRITNARNAKTLSPSHMRQC 73
            |...|..||||||::||::..::...||:.:|..|:|:..|..::...|.....:||..:.:...
plant    68 NHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA 132

  Fly    74 IVSEKRFDFLKELVRNIPDISVAEEAAYNEDDVLRSSPEEQYPDSDTPYDLSLPSTS 130
            :.....||||.::|.. .|:         .|:||.....|....:..||....|.|:
plant   133 VTRTDIFDFLVDIVPR-EDL---------RDEVLGGVGAEAATAAGYPYGYLPPGTA 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NC2alphaNP_611601.2 HFD_DRAP1 9..83 CDD:467031 21/73 (29%)
NF-YC3NP_175880.1 HFD_NFYC-like 64..147 CDD:467033 23/78 (29%)

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