DRSC/TRiP Functional Genomics Resources

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Protein Alignment NC2alpha and NF-YC6

DIOPT Version :10

Sequence 1:NP_611601.2 Gene:NC2alpha / 37471 FlyBaseID:FBgn0034650 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_199859.1 Gene:NF-YC6 / 835116 AraportID:AT5G50480 Length:202 Species:Arabidopsis thaliana


Alignment Length:163 Identity:41/163 - (25%)
Similarity:68/163 - (41%) Gaps:28/163 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NARFPAGRIKKIMQSDEEIGKVAQAVPVIISRTLELFVESLLTKTLRITNARNAKTLSPSHMRQC 73
            |.:.|..||||||::|.::..|:...|:|.::..|:|:..|..::..........||..|.:...
plant    52 NRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTLQKSDISNA 116

  Fly    74 IVSEKRFDFLKELVRNIPDISVAEE---AAYNEDDVLRSSPEEQYPDSDTPYDLSLPSTSMRSQA 135
            :.|...:|||.::|.....|:.|:.   |..:.|.  ...|:..||          |...|.:..
plant   117 VASSFTYDFLLDVVPKDESIATADPGFVAMPHPDG--GGVPQYYYP----------PGVVMGTPM 169

  Fly   136 NGTAAYMRSMSL------------NNGAGSGGG 156
            .|:..|..|.:.            :|| |:|||
plant   170 VGSGMYAPSQAWPAAAGDGEDDAEDNG-GNGGG 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NC2alphaNP_611601.2 HFD_DRAP1 9..83 CDD:467031 20/73 (27%)
NF-YC6NP_199859.1 HFD_NFYC-like 48..131 CDD:467033 22/78 (28%)

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