DRSC/TRiP Functional Genomics Resources

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Protein Alignment NC2alpha and NF-YC12

DIOPT Version :10

Sequence 1:NP_611601.2 Gene:NC2alpha / 37471 FlyBaseID:FBgn0034650 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_198630.2 Gene:NF-YC12 / 833794 AraportID:AT5G38140 Length:195 Species:Arabidopsis thaliana


Alignment Length:113 Identity:28/113 - (24%)
Similarity:51/113 - (45%) Gaps:10/113 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PAGRIKKIMQSDEEIGKVAQAVPVIISRTLELFVESLLTKTLRITNARNAKTLSPSHMRQCIVSE 77
            |..|::||::||.|:.|::..||.:.|:..|.|:..:..:....|.:...:|:....:.|.:.:.
plant    69 PLSRVRKILKSDPEVKKISCDVPALFSKACEYFILEVTLRAWMHTQSCTRETIRRCDIFQAVKNS 133

  Fly    78 KRFDFLKELVRNIPDISVAEEAAYNEDDVLRSSPEEQ-YPDSDTPYDL 124
            ..:|||.:.|...|. .|..:..        ..|.|. .||.:.|.|:
plant   134 GTYDFLIDRVPFGPH-CVTHQGV--------QPPAEMILPDMNVPIDM 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NC2alphaNP_611601.2 HFD_DRAP1 9..83 CDD:467031 17/69 (25%)
NF-YC12NP_198630.2 HFD_NFYC-like 67..144 CDD:467033 19/74 (26%)

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