DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NC2alpha and AT5G19490

DIOPT Version :10

Sequence 1:NP_611601.2 Gene:NC2alpha / 37471 FlyBaseID:FBgn0034650 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_197450.2 Gene:AT5G19490 / 832069 AraportID:AT5G19490 Length:264 Species:Arabidopsis thaliana


Alignment Length:123 Identity:31/123 - (25%)
Similarity:38/123 - (30%) Gaps:43/123 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   551 SYATREASRCIDQHTASYQKRGCVSSVAAGLCAELCLEKADLKSRSDSTSVPPLDSI---YTTPT 612
            ||.|..||..:.:|:            ...|.|..|       ||.......|.|.|   |....
plant     7 SYRTPSASPDVGKHS------------PLALLAATC-------SRIGQPGTGPADFIQFPYDPTI 52

  Fly   613 GFHHHHHHP---HHAAH-----HPHQNGTPGSPEAMKVRMAAMI----------LQPP 652
            |......||   ..:||     .|| ||...|  ..|.::|:.|          |.||
plant    53 GSPSRIFHPWTNEISAHSSGGIQPH-NGIGLS--TSKTQLASHIQSSFVTHELPLTPP 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NC2alphaNP_611601.2 HFD_DRAP1 9..83 CDD:467031
AT5G19490NP_197450.2 HFD_DRAP1 7..80 CDD:467031 23/92 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.