DRSC/TRiP Functional Genomics Resources

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Protein Alignment NC2alpha and chrac1

DIOPT Version :10

Sequence 1:NP_611601.2 Gene:NC2alpha / 37471 FlyBaseID:FBgn0034650 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001013311.1 Gene:chrac1 / 503606 ZFINID:ZDB-GENE-050227-18 Length:114 Species:Danio rerio


Alignment Length:106 Identity:26/106 - (24%)
Similarity:48/106 - (45%) Gaps:12/106 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NAR---FPAGRIKKIMQSDEEIGKVAQAVPVIISRTLELFVESLLTKTLRITNARNAKTLSPSHM 70
            |:|   .|..|::.||:|..::..:.|....:.::..||||:.|...:.....:::..|||.|.:
Zfish    10 NSRTISLPISRVRLIMKSSPDVSCINQDALFLTTKATELFVQHLALSSYENGPSKDTNTLSYSDL 74

  Fly    71 RQCIVSEKRFDFLKELVRNIPDISVAE------EAAYNEDD 105
            ...:...:.|.||.::   :|...:|.      |....|||
Zfish    75 ADTVEETETFQFLTDI---LPKKILARDYLKTLEEMEKEDD 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NC2alphaNP_611601.2 HFD_DRAP1 9..83 CDD:467031 18/76 (24%)
chrac1NP_001013311.1 HFD_CHRAC1-like 16..91 CDD:467049 18/77 (23%)

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