DRSC/TRiP Functional Genomics Resources

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Protein Alignment NC2alpha and NC2alpha

DIOPT Version :10

Sequence 1:NP_611601.2 Gene:NC2alpha / 37471 FlyBaseID:FBgn0034650 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_061512012.1 Gene:NC2alpha / 3291137 VectorBaseID:AGAMI1_003368 Length:427 Species:Anopheles gambiae


Alignment Length:445 Identity:161/445 - (36%)
Similarity:215/445 - (48%) Gaps:122/445 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPSKKKKYNARFPAGRIKKIMQSDEEIGKVAQAVPVIISRTLELFVESLLTKTLRITNARNAKTL 65
            ||||||||||||||||||||||:|||:|||||||||||||||||||||||||||:||||||||||
Mosquito     1 MPSKKKKYNARFPAGRIKKIMQTDEEVGKVAQAVPVIISRTLELFVESLLTKTLKITNARNAKTL 65

  Fly    66 SPSHMRQCIVSEKRFDFLKELVRNIPDISVAE-----EAAYNED-----DVLRSSPEEQYPDSDT 120
            |||||:|||:||.|||||::||:||||:.:.|     ||.|..:     ....||....|.:...
Mosquito    66 SPSHMKQCIISESRFDFLRDLVKNIPDMGINEELSGSEAGYGNEGTSPASTSTSSSSASYSNGGA 130

  Fly   121 -------------------PYDLSLPSTSMRSQANGTAAYMRSMSL------NNGAGSGGGAAAT 160
                               ||::..|::..||::...|.  .|:||      :|...|.|     
Mosquito   131 AAATASASASLIAGHHHHLPYEMVHPASLQRSESYTPAT--ASISLLPQHHHHNSQPSHG----- 188

  Fly   161 KR---QFQSQHSTQETPT--TSTTLPAKLARSGSMPAYTPRGRP-----------PNHLKKQSVQ 209
            ||   |..|.:..:|.|.  |.:..|.||.|..|.||   .|.|           ||.....:..
Mosquito   189 KRGLSQGGSLNFYKEIPLEGTESPPPPKLNRLNSAPA---GGAPTTPLPFKIDILPNLPAGSATT 250

  Fly   210 LDTAIPAPICNYELN-------------------------KPIVKIDYSHVQMPTANLCTPDASD 249
            :.:.:..|:..::.:                         :|::|:|||::::| |...:|..|.
Mosquito   251 VSSPVSKPVSTHQPSSGAITPQITYNFERLAAAAPSAPSLEPVIKLDYSNLRLP-ATSASPHGSR 314

  Fly   250 S------GSGSGAGSGAFNFDIAAPVINIDLTNIVAGGAP----------GSGVPPASIGLPAAT 298
            |      .|.|.:.|       ..|.|.|||:::..||..          ||..|.......|..
Mosquito   315 STGPVPVPSSSSSSS-------LQPTIKIDLSSLATGGTTALSSADGGGGGSRTPKKLTETGAGG 372

  Fly   299 PGDN-------NNVNQMAGKSSAPIIPKATAASATP-----TETVFELDEDYDNI 341
            .|.:       .:...:|..|:|...|.|:|.:|.|     :.|:..:|||||:|
Mosquito   373 AGGSKQYASPTTSTATLAANSAAVQSPVASALTAPPLFSALSSTIPGMDEDYDDI 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NC2alphaNP_611601.2 HFD_DRAP1 9..83 CDD:467031 67/73 (92%)
NC2alphaXP_061512012.1 None

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