DRSC/TRiP Functional Genomics Resources

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Protein Alignment NC2alpha and LOC1271801

DIOPT Version :10

Sequence 1:NP_611601.2 Gene:NC2alpha / 37471 FlyBaseID:FBgn0034650 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_061515216.1 Gene:LOC1271801 / 1271801 VectorBaseID:AGAMI1_009180 Length:473 Species:Anopheles gambiae


Alignment Length:362 Identity:80/362 - (22%)
Similarity:123/362 - (33%) Gaps:110/362 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NARFPAGRIKKIMQSDEEIGKVAQAVPVIISRTLELFVESLLTKTLRITNARNAKTLSPSHMRQC 73
            |...|..||||||:.|||:..::...|::.|:.:|:|::.|..:....|.....:||..|.:...
Mosquito    97 NQLLPLARIKKIMKLDEEVKMISSDAPLLFSKAIEIFIQELTLRAWLHTEHNKRRTLQRSDIAMA 161

  Fly    74 IVSEKRFDFLKELVR--------NIPDISVAEE---------AAYNEDDVLRSSPEEQYPD---- 117
            |....:||||.::|.        .:.|....:|         |:....:.:.|:......:    
Mosquito   162 ITKYDQFDFLIDIVPRDEIKGSWKVFDGPAQDECAAGGGGGPASTGGGEAVASASTATTSEGAAG 226

  Fly   118 ------SDTPYDLSL--------PST---SMRSQANGTAAYMRSMSLNNGAGSGGGAAATKRQFQ 165
                  .|..|.:.|        |.|   |..:..|.|::...:.||.|||.:....|......|
Mosquito   227 GTNGTADDMQYIMQLAQQHRLVQPGTDKGSCTATTNTTSSTATTSSLTNGATTVLDLATVMTGTQ 291

  Fly   166 SQHSTQETPTTSTTLPAKLARSGSMPAYTPRGRPPNHLKKQSVQLDTAIPAPICNYELNKPIVKI 230
            ..|  |.:...:.|.|||...:|:               :|.....|.:|:|             
Mosquito   292 QLH--QLSTVAAATKPAKGVVAGT---------------EQETAGATLLPSP------------- 326

  Fly   231 DYSHVQMPTANLCTPDASDSGSGSGAGSGAFNFDIAAPVINIDLTNIVAGGAPGSG-VPPAS--- 291
                 ..||....|..:....:| |||         ||          .|.|.||| :.|||   
Mosquito   327 -----AQPTIQTATGQSLILANG-GAG---------AP----------GGIANGSGQLVPASQSV 366

  Fly   292 -------------IGLPAATPGDNNNVNQMAGKSSAP 315
                         ..:|.:.|....|..:.||...||
Mosquito   367 QLLQHVMTPTGEITQIPISIPQSQLNFLRTAGPGGAP 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NC2alphaNP_611601.2 HFD_DRAP1 9..83 CDD:467031 23/73 (32%)
LOC1271801XP_061515216.1 None

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