DRSC/TRiP Functional Genomics Resources

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Protein Alignment NC2alpha and LOC1269743

DIOPT Version :10

Sequence 1:NP_611601.2 Gene:NC2alpha / 37471 FlyBaseID:FBgn0034650 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_308392.5 Gene:LOC1269743 / 1269743 VectorBaseID:AGAMI1_008369 Length:200 Species:Anopheles gambiae


Alignment Length:129 Identity:27/129 - (20%)
Similarity:54/129 - (41%) Gaps:25/129 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RFPAGRIKKIMQSDEEIGKVAQAVPVIISRTLELFVESLLTKTLRITNARNAKTLSPSHMRQCIV 75
            :.|..||:.:|::..::|.:......::.|:.|:|:|.:.....|    :..|:|....:.:|:.
Mosquito     8 QLPMSRIRTVMKTSPDMGNINPEALFLMCRSAEMFIEYMAKGAHR----QGKKSLEYKDLAKCVE 68

  Fly    76 SEKRFDFLKELV----------------RNIPDISVAEEAAYNEDDVLRSSPEEQYPDSDTPYD 123
            .:...:||.:::                |:..|.:.:||.|..|     |..||...|.|...|
Mosquito    69 EDDNLEFLSQILPKKITVKEYKTLMAKKRDTDDDTDSEEEADEE-----SGNEEANADDDDDDD 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NC2alphaNP_611601.2 HFD_DRAP1 9..83 CDD:467031 13/71 (18%)
LOC1269743XP_308392.5 None

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