DRSC/TRiP Functional Genomics Resources

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Protein Alignment PIG-M and pigm

DIOPT Version :9

Sequence 1:NP_611600.1 Gene:PIG-M / 37470 FlyBaseID:FBgn0034649 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_001008120.1 Gene:pigm / 493482 XenbaseID:XB-GENE-5730241 Length:419 Species:Xenopus tropicalis


Alignment Length:439 Identity:154/439 - (35%)
Similarity:225/439 - (51%) Gaps:71/439 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LRIALICYGQLHDSQSAVPYTDIDYKVVTDGARQVLAGDTPFARHTYRYSPIMAYLQTFNILLHP 97
            ||.||:.:|...|....|.|||:||.|.||.|..:..|.:|:.|.||||:|::|::.|.||.:..
 Frog    24 LRSALVLFGVYQDQTMLVKYTDVDYHVFTDAAEYLTQGVSPYKRATYRYTPLLAWILTPNIYVTE 88

  Fly    98 AWGKLLYATFDLLIATLIYR-LVHMEIKSQYQKTVQHLLSKFNRPRDSDQSLDALDERSHPENLA 161
            .:||:|:...|||.|.||:| ||...||                  ||                |
 Frog    89 LYGKMLFVCCDLLAAYLIHRILVDRGIK------------------DS----------------A 119

  Fly   162 RASACFWLYNPLTAVISTRGSGDCFSSFFVILTIYLLLKSEHNVTRSYWLIFGAGLAHGLVIHLR 226
            ......||:|||..|:|:||:.:...:..|:..:|.:.|..        ||.|| |.:||.:|::
 Frog   120 SLYCAIWLFNPLPMVVSSRGNAESVLAVLVLSVLYYVQKRR--------LIKGA-LIYGLSVHMK 175

  Fly   227 LYPLLFSLA---------YYLSLSTRLTQTPLDFLCQILRPNKQQL--------CLISGTLISLV 274
            :||:.:.|.         :|.|...:...:.|.:: :|.|...|:|        ..:||...:|:
 Frog   176 IYPITYILPIALFFQKEDFYGSQEGKRVVSNLKYI-RIFRNLLQRLLSRDILLFVTVSGVTFALL 239

  Fly   275 AFTWTFYTMYGWEYIYEAYLYHFVRKDPRHNFSLQFLLQYLGSASSVAEPSAILKTLVLAPQFLL 339
              |..||..||||::...||||..|:|.|||||..|.:.||.:.::   .|.||......||.:|
 Frog   240 --TLFFYYRYGWEFLENTYLYHLTRRDIRHNFSPYFYMLYLTAENN---NSFILGLAAFFPQLVL 299

  Fly   340 ILYLSLSFGQFRQTLPFCIFAVAFVIVTYNSVVTSQYFIWYLAILPLCLNNFKMLSWRRCFGLLF 404
            :..:||::  |:. ||||.|....:.|::|.|.|||||:|||.:|||.:...|| |......|:.
 Frog   300 LFVVSLAY--FKD-LPFCCFLHTAIFVSFNKVCTSQYFLWYLCLLPLVMPGLKM-SMTNGICLII 360

  Fly   405 LWLLAQALWLLPAYLLEFHTWNTFYWIGLQGAVFFATNGYILEQLLSHY 453
            ||..:||:||:|||.|||...|||.:|...|.:|...|..|:.|::|:|
 Frog   361 LWFFSQAIWLVPAYFLEFEGQNTFLYIWCAGLLFLLINTVIIVQIISNY 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-MNP_611600.1 Mannosyl_trans 177..450 CDD:252941 101/289 (35%)
pigmNP_001008120.1 PMT_2 24..414 CDD:419750 154/439 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 156 1.000 Domainoid score I4146
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6274
Inparanoid 1 1.050 232 1.000 Inparanoid score I3352
OMA 1 1.010 - - QHG53871
OrthoDB 1 1.010 - - D1003258at2759
OrthoFinder 1 1.000 - - FOG0004222
OrthoInspector 1 1.000 - - oto105285
Panther 1 1.100 - - LDO PTHR12886
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R511
SonicParanoid 1 1.000 - - X2968
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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