DRSC/TRiP Functional Genomics Resources

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Protein Alignment PIG-M and pigm

DIOPT Version :9

Sequence 1:NP_611600.1 Gene:PIG-M / 37470 FlyBaseID:FBgn0034649 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_956684.1 Gene:pigm / 393361 ZFINID:ZDB-GENE-040426-1393 Length:392 Species:Danio rerio


Alignment Length:433 Identity:160/433 - (36%)
Similarity:219/433 - (50%) Gaps:69/433 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SALLRIALICYGQLHDSQSAVPYTDIDYKVVTDGARQVLAGDTPFARHTYRYSPIMAYLQTFNIL 94
            :||||:.|:|.|...|....:.|||:||.|.||.||.:..|::|:.|.|:||:|::|.|...|:.
Zfish    12 AALLRLLLLCVGVYQDQTLKLKYTDVDYHVFTDAARFITQGESPYRRSTFRYTPLLALLLVPNVY 76

  Fly    95 LHPAWGKLLYATFDLLIATLIYRLVHMEIKSQYQKTVQHLLSKFNRPRDSDQSLDALDERSHPEN 159
            |...:||||:...|||...|::||:                              .|...||   
Zfish    77 LSLLFGKLLFGFCDLLSGLLMFRLL------------------------------VLRGASH--- 108

  Fly   160 LARASAC----FWLYNPLTAVISTRGSGDCFSSFFVILTIYLLLKSEHNVTRSYWLIFGAGLAHG 220
               .|||    .||.|||...:||||:.:...:..|:.|:..|...:|..         |.|..|
Zfish   109 ---GSACVSCGLWLLNPLPMAVSTRGNAESVLAVLVLSTLLCLQLRKHTT---------AALLFG 161

  Fly   221 LVIHLRLYPLLFSLAYYLSLSTRLTQTPL---DFLCQILRPNKQQLCLISGTLISLVAFTWTFYT 282
            |.:|:::||    :.|.|.::..||..|.   ..|.:...|...:...:|..:  .::....||.
Zfish   162 LSVHMKIYP----VTYALPIALALTAAPARGRGVLLRFFSPALLRFAAVSAAV--FLSLGLIFYC 220

  Fly   283 MYGWEYIYEAYLYHFVRKDPRHNFSLQFLLQYLGSASSVAEP--SAILKTLVLAPQFLLILYLSL 345
            .||||::.||||||..|:|.|||||..|.|||:     .||.  |:.|..|:|.||.||:|..|.
Zfish   221 RYGWEFLQEAYLYHLTRRDLRHNFSPFFYLQYV-----CAERCWSSGLLPLLLLPQLLLLLLASA 280

  Fly   346 SFGQFRQTLPFCIFAVAFVIVTYNSVVTSQYFIWYLAILPLCLNNFKMLSWRRCFGLLFLWLLAQ 410
            :|.   ..||||.|....|.|::|.|.|||||:|||.:||:.|...::...|... ||.||||.|
Zfish   281 AFS---SDLPFCCFLHTAVFVSFNRVCTSQYFLWYLCLLPVVLPRLRLRLGRGLL-LLLLWLLLQ 341

  Fly   411 ALWLLPAYLLEFHTWNTFYWIGLQGAVFFATNGYILEQLLSHY 453
            .|||.|||||||..||:|.||.....:|..||.:||.|::.||
Zfish   342 GLWLAPAYLLEFQGWNSFSWIWAASLLFLLTNTFILAQIIQHY 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-MNP_611600.1 Mannosyl_trans 177..450 CDD:252941 108/277 (39%)
pigmNP_956684.1 PMT_2 23..385 CDD:304453 154/422 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595900
Domainoid 1 1.000 178 1.000 Domainoid score I3530
eggNOG 1 0.900 - - E1_KOG3893
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6274
Inparanoid 1 1.050 256 1.000 Inparanoid score I3147
OMA 1 1.010 - - QHG53871
OrthoDB 1 1.010 - - D1003258at2759
OrthoFinder 1 1.000 - - FOG0004222
OrthoInspector 1 1.000 - - oto40958
orthoMCL 1 0.900 - - OOG6_102429
Panther 1 1.100 - - LDO PTHR12886
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R511
SonicParanoid 1 1.000 - - X2968
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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