DRSC/TRiP Functional Genomics Resources

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Protein Alignment PIG-M and pigm-1

DIOPT Version :9

Sequence 1:NP_611600.1 Gene:PIG-M / 37470 FlyBaseID:FBgn0034649 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_496426.1 Gene:pigm-1 / 174736 WormBaseID:WBGene00007189 Length:417 Species:Caenorhabditis elegans


Alignment Length:428 Identity:150/428 - (35%)
Similarity:229/428 - (53%) Gaps:39/428 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LLISALLRIALICYGQLHDSQSAVPYTDIDYKVVTDGARQVLAGDTPFARHTYRYSPIMAYLQTF 91
            ||::.:.||.|:.|..:||....|.:|||||.|.:|.|:.|..|.:||.|.||||:|.:|:: ..
 Worm    19 LLVAFVARIILVFYAHIHDYLFKVNFTDIDYHVFSDAAKHVSNGGSPFDRATYRYTPALAWI-LL 82

  Fly    92 NILLHPAWGKLLYATFDLLIATLIYRLVHMEIKSQYQKTVQHLLSKFNRPRDSDQSLDALDERSH 156
            .::..|.:||:|:..||:|:|.|.::::..::.....:|.:.:        ..||:::.:     
 Worm    83 PVVHFPDFGKILFCIFDILVAILYFKIMEKDLNETKSETREEM--------KDDQTMNVV----- 134

  Fly   157 PENLARASACFWLYNPLTAVISTRGSGDCFSSFFVILTIYLLLKSEHNVTRSYWLIFGAGLAHG- 220
                     .:||.|||||:||.||:.:...:..|:|.|.||.|       .||.  .|.|.|| 
 Worm   135 ---------IYWLANPLTAIISARGNAESIVAAVVLLNIVLLQK-------GYWK--SAALVHGA 181

  Fly   221 LVIHLRLYPLLFSLAYYLSLSTRLTQTPLDFLCQILRPNKQQLCLISGTLISLVAFTWTFYTMYG 285
            |.|.|::|||::..:.:|||||...|:.:....:.|..|.:....:..||.|..|....|:.:||
 Worm   182 LAIQLKIYPLIYLPSVFLSLSTIGEQSCVVNKFKSLVSNWKGFAYMLVTLTSFAAVVLFFFQIYG 246

  Fly   286 WEYIYEAYLYHFVRKDPRHNFSLQFLLQYLGSASSVAEPSAILKTLVLAPQFLLILYLSLSFGQF 350
            ..::.|..:||..|:|..||||..|.|.||..|:...  |.|:......||.:||::.:.   :.
 Worm   247 QLFLDEYLIYHVKRRDLAHNFSPYFYLLYLYEANPTM--SQIIGLGAFIPQIVLIVFFAF---KH 306

  Fly   351 RQTLPFCIFAVAFVIVTYNSVVTSQYFIWYLAILPLCLNNFKMLSWRRCFGLLFLWLLAQALWLL 415
            ...||||.|...|..||||.|.|||||:||:.:|||..:.. |:|.:....|:..|...|.:|||
 Worm   307 YDDLPFCWFITTFAFVTYNKVCTSQYFVWYIVLLPLLAHKI-MMSRQLALSLMAAWFATQGIWLL 370

  Fly   416 PAYLLEFHTWNTFYWIGLQGAVFFATNGYILEQLLSHY 453
            .|||.||..||||:.:.|...:|...|.:||:|:::||
 Worm   371 AAYLFEFQGWNTFFLMFLASCLFLIANSFILKQIINHY 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-MNP_611600.1 Mannosyl_trans 177..450 CDD:252941 101/273 (37%)
pigm-1NP_496426.1 Mannosyl_trans 146..405 CDD:252941 101/273 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167226
Domainoid 1 1.000 163 1.000 Domainoid score I2410
eggNOG 1 0.900 - - E1_KOG3893
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6274
Inparanoid 1 1.050 252 1.000 Inparanoid score I1986
Isobase 1 0.950 - 0 Normalized mean entropy S1177
OMA 1 1.010 - - QHG53871
OrthoDB 1 1.010 - - D1003258at2759
OrthoFinder 1 1.000 - - FOG0004222
OrthoInspector 1 1.000 - - oto18480
orthoMCL 1 0.900 - - OOG6_102429
Panther 1 1.100 - - LDO PTHR12886
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R511
SonicParanoid 1 1.000 - - X2968
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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