DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rae1 and BUB3.1

DIOPT Version :10

Sequence 1:NP_611597.1 Gene:Rae1 / 37467 FlyBaseID:FBgn0034646 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_566644.1 Gene:BUB3.1 / 821496 AraportID:AT3G19590 Length:340 Species:Arabidopsis thaliana


Alignment Length:357 Identity:120/357 - (33%)
Similarity:185/357 - (51%) Gaps:39/357 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFGATQSTNRMNDFEVASPPDDSVSALEFSPSTVQKNFLVAGSWDSTVRCWEVEQNGATVPKSMK 65
            |...|.|..|    |:::||.|.:|.|.||.::   :.|:..|||..||.::|..|..   |...
plant     1 MTTVTPSAGR----ELSNPPSDGISNLRFSNNS---DHLLVSSWDKRVRLYDVSTNSL---KGEF 55

  Fly    66 TMGGPVLDVCWSDDGSKVFVASCDKQVK--LWDLASDQVMQVAAHDGPVKTCHMVKGPTYTC--L 126
            ..||.|||.|:.||.|. |....|.:|:  ::::..:.::  ..||..|:....    :|..  :
plant    56 LHGGAVLDCCFHDDFSG-FSVGADYKVRRIVFNVGKEDIL--GTHDKAVRCVEY----SYAAGQV 113

  Fly   127 MTGSWDKTLKFWDTRSPN-----PMMTINLPERCYCADVEYPMAVVGTANRGLIIYSLQNSPTEY 186
            :|||||||:|.||.|..:     .:.|...|||.|...:.....||.||.|.:.||.|:|.....
plant   114 ITGSWDKTVKCWDPRGASGPERTQVGTYLQPERVYSMSLVGHRLVVATAGRHVNIYDLRNMSQPE 178

  Fly   187 KRQESPLKYQHRAISIFRDKKKEPTGCALGSIEGRVAIQY--VNPGNPKDNFTFKCHRTTGTSGY 249
            :|:||.||||.|.:..:    ...||.||.|:|||||:::  ::.......:.|||||.: .:|.
plant   179 QRRESSLKYQTRCVRCY----PNGTGYALSSVEGRVAMEFFDLSEAAQAKKYAFKCHRKS-EAGR 238

  Fly   250 QDIYAVNDIAFHPVHGTLVTVGSDGTFSFWDKDARTKLKSSETMDQSITKCGFNANGQIFAYAVG 314
            ..:|.||.|||||::||..|.|.||..:.||.:.:.:|........||:...|:.:||:.|.|..
plant   239 DIVYPVNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQLLAVASS 303

  Fly   315 YDWSKGHEYFNPAKKPQ-IFLRSCYD-ELKPR 344
            |.:.:|.:    :::|: ||:||..: |:||:
plant   304 YTFEEGEK----SQEPEAIFVRSVNEIEVKPK 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rae1NP_611597.1 WD40 <21..316 CDD:441893 103/305 (34%)
WD40 repeat 25..66 CDD:293791 13/40 (33%)
WD40 repeat 71..105 CDD:293791 10/35 (29%)
WD40 repeat 113..150 CDD:293791 13/43 (30%)
WD40 repeat 157..239 CDD:293791 27/83 (33%)
WD40 repeat 255..293 CDD:293791 16/37 (43%)
BUB3.1NP_566644.1 WD40 <17..303 CDD:441893 103/303 (34%)
WD40 repeat 20..56 CDD:293791 13/41 (32%)
WD40 repeat 62..96 CDD:293791 9/36 (25%)
WD40 repeat 101..142 CDD:293791 14/44 (32%)
WD40 repeat 148..182 CDD:293791 11/33 (33%)
WD40 repeat 189..229 CDD:293791 11/43 (26%)
WD40 repeat 244..281 CDD:293791 16/36 (44%)

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