DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rae1 and Wdr92

DIOPT Version :9

Sequence 1:NP_611597.1 Gene:Rae1 / 37467 FlyBaseID:FBgn0034646 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_649025.1 Gene:Wdr92 / 39997 FlyBaseID:FBgn0036771 Length:375 Species:Drosophila melanogaster


Alignment Length:343 Identity:69/343 - (20%)
Similarity:113/343 - (32%) Gaps:121/343 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 KTMGGPVLDVCWSDDGSKVFVASCDKQV------------------------KLWDLASDQ---- 101
            |..|..::|:...:....|.|.|.:|:|                        :|..|..:|    
  Fly    36 KANGHGIMDIYELNQDKLVKVKSVEKKVAFKCGTFGAASLRNRHMAIGDFEGRLQVLDMEQPDLP 100

  Fly   102 VMQVAAHDGPVKTCHMVKGPTYTC----LMTGSWDKTLKFWDTR---------SPNPMM------ 147
            |..|.||:|.:.|...:.|....|    ::|||.|..:|.||.|         ||.|.|      
  Fly   101 VYNVKAHNGIINTIDAIGGTQIDCGAPEIVTGSRDGAVKVWDIRQGQAPVVDMSPPPQMGDGVNN 165

  Fly   148 --------------TINLPERCYCADVEYPMAVVGTANRGLIIYSLQNSPTEYKRQESPLKYQHR 198
                          |.|..||...|         |..|..|.|:.|::...   |.|:.:|  :.
  Fly   166 SSGRRDCWAVAFGNTYNAEERIVAA---------GYDNGDLKIFDLRSLSV---RWEATMK--NG 216

  Fly   199 AISIFRDKKKEPTG-CALGSIEGRVAIQYVNPGNPKDNFTF----KCHRTTGTSGY-----QDIY 253
            ...:..|::..|.. .|:.::||.:.:..:...:|...|::    ...|:.||:|.     ..::
  Fly   217 ICGLEFDRRDIPMNKLAVTTLEGGLLVFDMRTQHPTKGFSYVEERNAGRSVGTNGVISGPKATVW 281

  Fly   254 AVNDIAFHPVHGTL-VTVGSDGTFSFW-----------DKDAR-------TKLKSSETMDQSITK 299
            .|..:   |.:..| :|.|..|:...|           |.|..       ..:.|:.|:......
  Fly   282 VVRHL---PQNRDLFLTGGGTGSIRLWQYEYPDRRVIDDSDGNKLGVAGALNMLSAATLSSQPVH 343

  Fly   300 CGFNANGQIFAYAVGYDW 317
            |              :||
  Fly   344 C--------------FDW 347

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Rae1NP_611597.1 WD40 22..310 CDD:421866 67/334 (20%)