DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rae1 and Bub3

DIOPT Version :9

Sequence 1:NP_611597.1 Gene:Rae1 / 37467 FlyBaseID:FBgn0034646 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001041371.2 Gene:Bub3 / 361662 RGDID:1306654 Length:326 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rae1NP_611597.1 WD40 22..310 CDD:421866
WD40 repeat 25..66 CDD:293791
WD40 repeat 71..105 CDD:293791
WD40 repeat 113..150 CDD:293791
WD40 repeat 157..239 CDD:293791
WD40 repeat 255..293 CDD:293791
Bub3NP_001041371.2 WD40 14..296 CDD:421866
WD40 repeat 17..54 CDD:293791
WD40 repeat 60..94 CDD:293791
WD40 repeat 99..134 CDD:293791
WD40 repeat 141..175 CDD:293791
WD40 repeat 182..222 CDD:293791
WD40 repeat 237..274 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1048963at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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