DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-B12 and ndub-3

DIOPT Version :10

Sequence 1:NP_611596.1 Gene:ND-B12 / 37466 FlyBaseID:FBgn0034645 Length:110 Species:Drosophila melanogaster
Sequence 2:NP_495907.1 Gene:ndub-3 / 174428 WormBaseID:WBGene00007684 Length:103 Species:Caenorhabditis elegans


Alignment Length:121 Identity:41/121 - (33%)
Similarity:57/121 - (47%) Gaps:29/121 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGHHGEPYTVPHASTY-KVESVPQLVEVKEALGRQGLKDPWLRNEVWRYE---PKAFG--THRS 59
            |||.|.||:.:|:.|.| .....|||.:.::.|.:.||||||:||.|:.|:   |...|  .|..
 Worm     1 MGGGHHEPFKIPNYSIYSNFRDFPQLAQHEKRLAQIGLKDPWIRNYVYLYDRKYPHVVGQWAHFK 65

  Fly    60 RLNTFLFRG--LGVGFCAFLATVAVEYALGIGKGQGGHGHGHGHEEHGD---KGHH 110
            :|   :..|  .||.|.|  |.:.||.|             :.::.||.   .|||
 Worm    66 KL---ILPGWKAGVAFTA--ALIFVEEA-------------YQYKTHGTTSWDGHH 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-B12NP_611596.1 NDUF_B12 38..86 CDD:462364 20/54 (37%)
ndub-3NP_495907.1 NDUF_B12 39..95 CDD:462364 21/73 (29%)

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