DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10321 and e4f1

DIOPT Version :9

Sequence 1:NP_001261124.1 Gene:CG10321 / 37464 FlyBaseID:FBgn0034643 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001020684.1 Gene:e4f1 / 561158 ZFINID:ZDB-GENE-050913-103 Length:719 Species:Danio rerio


Alignment Length:629 Identity:129/629 - (20%)
Similarity:210/629 - (33%) Gaps:212/629 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 DHHEHHQVMINEDLTQSESQD-HEYFDDLDQQQAMD------------EIEDEEEQMKPEEDQDT 428
            |..||..::..:.....|.:| |:....|.:..|:|            ..:|.:..:.|.|.   
Zfish    14 DQTEHSNIITIQTTLGDEDEDIHKCGKCLAEFSALDAFIQHKLSRSCKRTQDPQTNVVPNEG--- 75

  Fly   429 FIIEEIQLEDDEMLDDPDGEEIDQDCEYIGEEQDPHL-SGDVDDDLEYSIMEP-----------P 481
             :..|::..::|.       ..|:.....||:||..: |||.......|..|.           .
Zfish    76 -VSVEVRSSENEC-------SSDETATANGEKQDAKVASGDKKRSRSTSEDESSSPSKVVWKLNT 132

  Fly   482 DGETSVDI------------DQAFMDSEQS-------------------HHQQHQEE-------- 507
            :|....||            ...|..|:|.                   |.::|.:|        
Zfish   133 EGRYVCDICAKTFKTTNILRTHMFTHSDQKNFVCEMCETAFRTKGSLIRHKRRHTDERPYRCNQC 197

  Fly   508 -------------MQSISLENAVVEFSQATTTTEALVGPTMTVSSASPTPKRAKRSNHQIP---- 555
                         ::|::.....:.:||......:..|....|..:||.|::     .|||    
Zfish   198 GLAFRESGALTRHLKSLTPCTEKIRYSQCKEILVSKDGIRKEVQPSSPEPEK-----EQIPVVRV 257

  Fly   556 --AG---VTLEPCDH------QPPAAGSTTSSKL---AAANSRQLVQTASVIAAA---------- 596
              ||   :.:|..:.      ||..|....:..|   |..||...::|.:..||.          
Zfish   258 VEAGQEIIQIEVVEEVQQVASQPQTATVVEADNLICQAIINSGIALETEATEAAGQVEAQSPKAV 322

  Fly   597 -GA-DDNYEIDANLVT----EFIRQHT--------SPLGSGRYICHLCSTEFRQFKGLQNHMHSH 647
             || :....|....||    |.:.:.|        .|:.|..|.|..|...|:....|:.|:..|
Zfish   323 LGAPETETRITEIQVTEECVETLAEETQDSSVKEVEPVQSKLYKCPHCERMFKTLNYLRVHVKGH 387

  Fly   648 TNWIRANC----------------------KKQPQCQICLKSFKGPGMLRMHMKTHDAESSTPM- 689
            ..:....|                      :::.:|..|.|.||..|.:|.||:.|..|  .|. 
Zfish   388 VGYKPFKCLTCQKEFLTGYVLKKHMETHVSERRYKCGECGKQFKAIGHVREHMRAHSDE--RPYH 450

  Fly   690 CTICNRTFKSKAILYRHRQTH-QQRAYCCGVANCRKNFSSAVNLKWHVERKHPEVVDPLFKCGEC 753
            |:.|::::|:|..|..|.:|| ..:.|.|  .:|.:.|.....|..|:  :|.....| |||.:|
Zfish   451 CSFCDKSYKTKNALQVHHRTHADDKPYVC--QHCSRGFREKSALVRHI--RHHTGEKP-FKCSKC 510

  Fly   754 GSLYDNVDSLQLHV-------------ESTDHSAEVQISGQDDAFSGAVSIVSNGTTDMSNMMAT 805
            |..:....:|..|:             |...:|.|.:::.:    |.:.:|||:           
Zfish   511 GRGFAEHGTLNRHLRAKGGCFAQLKDCEHVVNSEEQEVTTE----SVSTTIVSD----------- 560

  Fly   806 GQGTTLAGGTGDTHAVVMGSSGEV-----YFVTQAXPAEFAAAG 844
                       |.|||::..|..|     |.:  . |||.||.|
Zfish   561 -----------DPHAVLVEFSSVVADTQEYII--GAPAEEAAQG 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10321NP_001261124.1 zf-AD 12..80 CDD:214871
ASF1_hist_chap <405..516 CDD:304562 27/186 (15%)
C2H2 Zn finger 627..647 CDD:275368 5/19 (26%)
C2H2 Zn finger 661..681 CDD:275368 9/19 (47%)
C2H2 Zn finger 690..710 CDD:275368 6/19 (32%)
C2H2 Zn finger 717..740 CDD:275368 5/22 (23%)
C2H2 Zn finger 750..767 CDD:275368 4/16 (25%)
e4f1NP_001020684.1 Required for ubiquitin ligase activity. /evidence=ECO:0000250 20..63 6/42 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..125 15/76 (20%)
Mediates dimerization and DNA-binding. /evidence=ECO:0000250 128..207 9/78 (12%)
C2H2 Zn finger 138..158 CDD:275368 3/19 (16%)
zf-C2H2 164..186 CDD:278523 1/21 (5%)
C2H2 Zn finger 166..186 CDD:275368 1/19 (5%)
zf-H2C2_2 178..201 CDD:290200 3/22 (14%)
C2H2 Zn finger 194..212 CDD:275368 0/17 (0%)
C2H2 Zn finger 367..387 CDD:275368 5/19 (26%)
C2H2 Zn finger 395..415 CDD:275368 1/19 (5%)
zf-H2C2_2 408..431 CDD:290200 3/22 (14%)
C2H2 Zn finger 423..443 CDD:275368 9/19 (47%)
zf-H2C2_2 435..460 CDD:290200 8/26 (31%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 479..499 CDD:275368 5/23 (22%)
zf-H2C2_2 491..515 CDD:290200 9/26 (35%)
C2H2 Zn finger 507..525 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24399
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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