DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10321 and ranshi

DIOPT Version :9

Sequence 1:NP_001261124.1 Gene:CG10321 / 37464 FlyBaseID:FBgn0034643 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster


Alignment Length:540 Identity:101/540 - (18%)
Similarity:175/540 - (32%) Gaps:227/540 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 TNGQATAAQSQFLPQLLQTPNGQTLQIVQQPNGTQTLQLVQLVPQRSLAPTGVTTVTTTTNATDM 319
            |.|:.|.|:             ::|.|.::.|.| ||:.::|:           |.....|.:.:
  Fly     8 TCGKRTNAE-------------RSLNIFEKRNQT-TLEHIKLL-----------TGAVLKNCSTL 47

  Fly   320 GQHVGASLGDADVQLLEDGCEVEDEELEDVYEQLDSKADHSFETIVLDDDQQQDFLKDHHEHHQV 384
            ...:.||....    |:......:..||...|.|.|:.|             :|||:...|..:.
  Fly    48 PNRLCASCQTC----LQQAISFRERCLEVQRELLHSQDD-------------EDFLRICQESPKS 95

  Fly   385 MINEDLTQSE----SQDHEYFDDLDQ---QQAMDEIEDEEEQMKPEEDQDTFIIEEIQLEDDEML 442
            ::.::..:.:    |.:.|..|||::   |.:..::||              |:.|.::.:||  
  Fly    96 VLEQEELELDLAEISIEVERLDDLNEGPIQSSGFKVED--------------ILNESKINEDE-- 144

  Fly   443 DDPDGEEIDQDCEYIGEEQDPHLSGDVDDDLEYSIMEPPDGETSVDIDQAFMDSEQSHHQQHQEE 507
              |:.|                      ||::||.|:....|:..::|.             ::|
  Fly   145 --PNNE----------------------DDIDYSEMDYLIYESDTEVDA-------------KQE 172

  Fly   508 MQSISLENAVVEFSQATTTTEALVGPTMTVSSASPTPKRAKRSNHQIPAGVTLEPCDHQPPAAGS 572
            ::|.| ||                            ||  ||.|.:.|.                
  Fly   173 LKSDS-EN----------------------------PK--KRRNRRNPR---------------- 190

  Fly   573 TTSSKLAAANSRQLVQTASVIAAAGADDNYEIDANLVTEFIRQHTSPLGSGRYICHLCSTEFRQF 637
                                            |:|..               :.|..|.      
  Fly   191 --------------------------------DSNRT---------------FFCEECG------ 202

  Fly   638 KGLQNHMHSHTNWIRANCK-----KQPQCQICLKSFKGPGMLRMHMKTHDAESSTPM-CTICNRT 696
                ||:....::| .:||     |:..|:.|...|..|..|:.|::.|..|.  |. |..|:|:
  Fly   203 ----NHIKDRISFI-LHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEK--PFKCRHCSRS 260

  Fly   697 FKSKAILYRHRQTH-QQRAYCCGVANCRKNFSSAVNLKWHVERKHPEVV---DPLFKCGECGSLY 757
            |...:...:|.:|| .:|.:.|  ..|...|:::..||.|:      :|   :..|:|..|..|:
  Fly   261 FSDYSTRLKHERTHTNERPFVC--KECNNAFTTSYILKNHM------LVHTGEKAFRCDLCDKLF 317

  Fly   758 DNVDSLQLHVESTDHSAEVQ 777
            .....|..|..|..|...:|
  Fly   318 SRYTHLTTHYRSNAHRRNMQ 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10321NP_001261124.1 zf-AD 12..80 CDD:214871
ASF1_hist_chap <405..516 CDD:304562 20/113 (18%)
C2H2 Zn finger 627..647 CDD:275368 4/19 (21%)
C2H2 Zn finger 661..681 CDD:275368 6/19 (32%)
C2H2 Zn finger 690..710 CDD:275368 5/19 (26%)
C2H2 Zn finger 717..740 CDD:275368 6/22 (27%)
C2H2 Zn finger 750..767 CDD:275368 4/16 (25%)
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 19/97 (20%)
C2H2 Zn finger 198..218 CDD:275368 7/30 (23%)
COG5048 222..>276 CDD:227381 17/55 (31%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 8/25 (32%)
C2H2 Zn finger 254..274 CDD:275368 5/19 (26%)
zf-H2C2_2 269..291 CDD:290200 7/23 (30%)
C2H2 Zn finger 282..302 CDD:275368 6/27 (22%)
zf-H2C2_2 295..319 CDD:290200 8/29 (28%)
C2H2 Zn finger 310..328 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
00.000

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