DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and PTP3

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_010998.2 Gene:PTP3 / 856807 SGDID:S000000877 Length:928 Species:Saccharomyces cerevisiae


Alignment Length:1279 Identity:249/1279 - (19%)
Similarity:416/1279 - (32%) Gaps:474/1279 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 KSEHNSPTILFKDESSTTPGLEASRLSYSPKLLSSINNLNVSGSPLNIINSAGYKNGNFFRFPEI 235
            |...:.|:||..|.:|.        ||.:..|:.|.:::....:|:|..:::  .|.|.:..|:.
Yeast     2 KDSVDCPSILPTDRTSV--------LSETSTLVGSSSHVYSRHAPMNSYHNS--MNSNIYHSPKA 56

  Fly   236 DH-VVQDAPMDTVCLEEATRRDRSPALA--EPPEQQQQKSEGRKNRKNKNNLTIRITDVPIKNSS 297
            .. :|.......|.|:.||    :|.|.  :|.||:..|.:|          ...||.|      
Yeast    57 SSPLVSYKTSSPVLLKRAT----APVLPSFKPKEQRYNKPQG----------CSLITAV------ 101

  Fly   298 QPSPLPKPKTPTIKSTKEKARSLDSAANESELSIVVHNITESHGSCDDMETGQSQPSTSVIHHHL 362
                             |..:.:::..:|..|.:.|...||.              :.|:|.:.:
Yeast   102 -----------------ELGKIIETLPDEKVLLLDVRPFTEH--------------AKSIITNSI 135

  Fly   363 HLQQPASAIHSTSLSRLDSHLSLANQRRTPRRKSP-----GINTTDWLMYHRKQNPYQVQPTHCS 422
            |:..|     ||.|.|.:...|......||..:|.     .|:....::|               
Yeast   136 HVCLP-----STLLRRKNFTFSKLLDNLTPSEQSVLKSKLAIDNLRIIIY--------------- 180

  Fly   423 STTQSSLDSDASLTPSLG--------DFELKSACSV--DGGSKFGIGASLAPRSAHKHNQLLHSS 477
            .:|.:..:|..|| |..|        |..:|...|:  .|..:|               ::|...
Yeast   181 DSTANQTESSVSL-PCYGIASKLIEFDTNVKKTVSILMCGFPQF---------------KILFPD 229

  Fly   478 STNLKTL-PECLTLVEFSSSGGGPKESPFKQKSMDLPMPTLQAKTTVSTSSMNLLQRRGSNHSLT 541
            ..|..|. .:|::..|..|    ||.:  ...|:....|.:.|.|.:|:..|||..:...     
Yeast   230 HINTNTFNSDCISSAEPKS----PKTN--LMNSLHNTAPHMTATTPLSSPQMNLKLKVPD----- 283

  Fly   542 LNLHSSCGNLMNSGLSHSNYSLGSILNSKSSCNLDAGTASQIRADQLPQSHLLGSSQGSRQGLFR 606
                       :|...|||:|     :|.|..|:            |..|.:..||..|  .||:
Yeast   284 -----------DSRSDHSNFS-----SSPSPRNV------------LSDSPMSSSSPIS--ALFK 318

  Fly   607 RRGSNHSITLKTGHTTTSCGDLNSMQQLQQQQAMLSAEKY-NRLNMRTNSTGSGSGSGSNVPTPK 670
                   ..|....|     ::|.|.:..|.:.::..|.| :.:|::...               
Yeast   319 -------FQLPAPQT-----NINQMFKFSQNEEIMGLETYLSAVNIKEEH--------------- 356

  Fly   671 RGLLERRGSNQSLTLNMGSILGGAAGTEIQMTDIVQPKVTVCSCAAANQAPHQRKFFSTENLNSS 735
                ||..:|.|                                  |.::....:|...:|....
Yeast   357 ----ERWYNNDS----------------------------------AKKSLQNFQFPKNQNSLEK 383

  Fly   736 KANSQKFFGQVCFGSASDLQPNPQQDSVREDQAIGATCTCAGTVRNIMTRPLSPQTTSEEFKIYL 800
            ..|..|...|:.:   .:|..|.:::.:  |..|                        .|:..:|
Yeast   384 DTNKDKLGFQIRY---ENLSKNYEKEVI--DSVI------------------------PEWFQHL 419

  Fly   801 ASIQMLQSASNPLNQFDLI---RLNYVFDHSYQTNRNIIEQPPVLGSNARDVETPTDMVPPSSED 862
            .||..::..|. ..:.|.:   |||:......:.|..|:|:|...........:.| ::||...|
Yeast   420 MSIPKIELVSQ-FQKLDFLEKRRLNHSVSFRKKENSFILEKPSSYPEQLTSTSSST-IMPPKFPD 482

  Fly   863 SELLASYQTVVSRMAQPIPELKENEQKRIFRDLHKEFWDLPL----NHQEKPMVFGS----QTKN 919
                      |:::.      |.:..:.||....|....|.|    :.:...::..|    ..||
Yeast   483 ----------VNKVQ------KRSHSQPIFTQYSKYKSMLSLESDSDSESDDVIISSGVELGAKN 531

  Fly   920 RYKTILPNENSRVLLES--ESSELTSLLGEIKRTSSVTASEDLP-YINANYIKGPDYVSK----- 976
            |||.|.|.|:|||:|:.  :||:      .||.:.|.:....|. ||||||:..|.:..:     
Yeast   532 RYKDIFPYEHSRVILKKGLQSSK------GIKHSHSTSDGGILDNYINANYLSLPRFSVEQNSSF 590

  Fly   977 ----------CYVATQGPLPNTIFEFWLMIYQN-----------TQRYIRRCV---DGGSSSSPH 1017
                      .|:|||.|:|:|:.:|:..|..|           .:..|.:|.   ..|:.:..|
Yeast   591 QTTTTTTRRVRYIATQAPMPSTVHDFYTCILNNGVPLVLSLTNDFENGIEKCYRYWQEGNYNGIH 655

  Fly  1018 VDREQILQQYFQKIVMLTNFTEANR-----QKCAVYFPIELNEIFAVAAKCEVFQLSAAARDYFD 1077
            |   ::|:   :||:.:.:.|...:     |..::|                    ||..:....
Yeast   656 V---KLLE---KKILKMPSTTSMRKNTMGTQNSSLY--------------------SAGVQGNSS 694

  Fly  1078 RYLTPTFVPDTVVASSDAIDYEISGRHIGVESVKVTL------EGDLLEALPAQGSFFLIKNVGI 1136
            .|.|           .:..|.:.:..:....::.||.      :.|..:|:              
Yeast   695 NYST-----------DNDNDNDNNNNNNNNSNIAVTAAACDDDDDDDDDAI-------------- 734

  Fly  1137 VRRNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPDWPDHHSPRDINTLLD--TCLHVLNLG 1199
                  .:||::|.|   ..|...|.|.:|.     ..:||      |:.|||:  :.|..:|:.
Yeast   735 ------LIRKILLTY---HDQEKPYELLQIQ-----VKNWP------DLGTLLNPISILQAINVK 779

  Fly  1200 KCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQPLPVIHCSAGIGRTGCFTAILNAVRQLR 1264
                  :...||...||         .||.|..    |..::|||||.||||....|.:.:..  
Yeast   780 ------NHIIDTLFARN---------YYQNDQL----PTILVHCSAGCGRTGTLCTIDSILSN-- 823

  Fly  1265 QSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNTIRHISHILDHRDAEAVKTPPSFDRLPKM 1329
                :.:..||.|                                     |.||.        |.
Yeast   824 ----FEMFEMLQK-------------------------------------EFVKL--------KY 839

  Fly  1330 PDIFVDVLGIVCNL-RLQRGGMVQNSEQYELIHRAICLYLKRTL 1372
            |....|.:....|: |.||..||||..|:..|:..:..|.:..|
Yeast   840 PAKLFDPISWTINIFRKQRISMVQNINQFIFIYDCLLFYFRLRL 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 108/493 (22%)
PTPc 917..1364 CDD:238006 108/492 (22%)
PTP3NP_010998.2 DSP_MapKP 97..231 CDD:238723 35/206 (17%)
PTP_fungal 571..873 CDD:350509 90/442 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 49 1.000 Domainoid score I2978
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19134
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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