DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and PTP1

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_001031266.1 Gene:PTP1 / 843516 AraportID:AT1G71860 Length:340 Species:Arabidopsis thaliana


Alignment Length:542 Identity:110/542 - (20%)
Similarity:173/542 - (31%) Gaps:246/542 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   844 SNARDVETPTDMVPPSSEDSELLASYQTVVSRMAQPIPELKENEQK-RIFR-------DLHKEFW 900
            |:|.::.|.:.....||.||.        .|:::....:|....|. .:||       .:..||.
plant     7 SSAANLFTGSTRFDLSSADSP--------PSKLSLSSDQLNHCHQALGVFRGKIQNPDSIAHEFT 63

  Fly   901 DLPLNHQEKPMVFGSQT---------KNRYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTA 956
            .|..|......:..:.|         ||||..::|.:.:|::|..            .:.||...
plant    64 GLQANRMWPSELLLNSTVAMNSVNVEKNRYSDVVPFDKNRIVLNP------------CKDSSAKG 116

  Fly   957 SEDLPYINANYIKGPDYVS-KCYVATQGPLPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDR 1020
                 |:||:.||..:..| ..::|||||||:|:.:||                           
plant   117 -----YVNASLIKTSESESISQFIATQGPLPHTMEDFW--------------------------- 149

  Fly  1021 EQILQQYFQKIVMLTNFTEANRQ-KCAVYFPIELNEIFAVAAKCEVFQLSAAARDYFDRYLTPTF 1084
            |.::||:...|||||...:.||. ||..|                 ||.....|::.:..||..:
plant   150 EMVIQQHCPIIVMLTRLVDNNRTVKCGDY-----------------FQDEDGPREFGNISLTTKW 197

  Fly  1085 VPDTVVASSDAIDYEISGRHIGVESVKVTLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVL 1149
            :..|        |..:..|::.| :.|.|.:                                  
plant   198 IKTT--------DTSLMLRNLEV-NYKETED---------------------------------- 219

  Fly  1150 LYCIRVPQSASYHLQKIYCYHYWYPDWPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSE 1214
                          |.:...|..||:||||..|:|.                             
plant   220 --------------QPMSVLHIQYPEWPDHGVPKDT----------------------------- 241

  Fly  1215 RNAHLAAQRL--EIYQQDIFNAVQPLPVIHCSAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTK 1277
                :|.:.:  .:||  :..::.|: ::||||||||||.:.||.|.::::       |.|    
plant   242 ----VAVREILKRLYQ--VPPSLGPI-IVHCSAGIGRTGTYCAIHNTIQRI-------LAG---- 288

  Fly  1278 SLTSSSTEEYHNPTDSDSSFTCNTIRHISHILDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCN 1342
                                               |..|                 :|:...|..
plant   289 -----------------------------------DMSA-----------------LDLAKTVAL 301

  Fly  1343 LRLQRGGMVQNSEQYELIHRAI 1364
            .|.||.||||..:||...:.||
plant   302 FRKQRIGMVQTMDQYFFCYNAI 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 92/460 (20%)
PTPc 917..1364 CDD:238006 92/459 (20%)
PTP1NP_001031266.1 PTPc_plant_PTP1 117..321 CDD:350496 82/403 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19134
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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