DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and PTPRG

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:XP_016862450.1 Gene:PTPRG / 5793 HGNCID:9671 Length:1485 Species:Homo sapiens


Alignment Length:547 Identity:123/547 - (22%)
Similarity:186/547 - (34%) Gaps:236/547 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   829 YQTNRNIIEQPPVLGSNARDVETPTDMVP--PSSEDSELLASYQTVVSRMAQPIPELKENEQ--- 888
            :||....:|.    .|:.|.|  |.:.:|  |..:|.|.:.     |.:..:.|.||..|.|   
Human   835 FQTAHFYVED----SSSPRVV--PNESIPIIPIPDDMEAIP-----VKQFVKHIGELYSNNQHGF 888

  Fly   889 KRIFRDLHKEFWDLPL-----NHQEKPMVFGSQTKNRYKTILPNENSRVLLESESSELTSLLGEI 948
            ...|.::.:...|:.:     ||.|      ::.||||..||..::|||       :|..|.|:.
Human   889 SEDFEEVQRCTADMNITAEHSNHPE------NKHKNRYINILAYDHSRV-------KLRPLPGKD 940

  Fly   949 KRTSSVTASEDLPYINANYIKGPDYVSKCYVATQGPLPNTIFEFWLMIY-QNTQRYIRRCVDGGS 1012
            .:.|.        ||||||:.|.: .:|.|:||||||.:|..:||.||: |||            
Human   941 SKHSD--------YINANYVDGYN-KAKAYIATQGPLKSTFEDFWRMIWEQNT------------ 984

  Fly  1013 SSSPHVDREQILQQYFQKIVMLTNFTEANRQKCAVYFPIELNEIFAVAAKCEVFQLSAAARDYFD 1077
                            ..|||:||..|..|:||..|:|.|.:|.:.                   
Human   985 ----------------GIIVMITNLVEKGRRKCDQYWPTENSEEYG------------------- 1014

  Fly  1078 RYLTPTFVPDTVVASSDAIDYEISGRHIGVESVKVTLEGDLLEALPAQGSFFLIKNVGIVRRNGY 1142
                                           ::.|||:...:.|...            |||  :
Human  1015 -------------------------------NIIVTLKSTKIHACYT------------VRR--F 1034

  Fly  1143 SVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPDWPDHHSPRDINTLLDTCLHVLNLGKCESEFDI 1207
            |:|...:....:.......:.:.:..||  |..|||...|       :..|.||...:..|    
Human  1035 SIRNTKVKKGQKGNPKGRQNERVVIQYH--YTQWPDMGVP-------EYALPVLTFVRRSS---- 1086

  Fly  1208 YDDTRSERNAHLAAQRLEIYQQDIFNAVQPLPVIHCSAGIGRTGCFTAILNAVRQLRQSLAYSLT 1272
                        ||:..|         ..|: ::|||||:||||.:..|.:.::|::        
Human  1087 ------------AARMPE---------TGPV-LVHCSAGVGRTGTYIVIDSMLQQIK-------- 1121

  Fly  1273 GMLTKSLTSSSTEEYHNPTDSDSSFTCNTIRHISHILDHRDAEAVKTPPSFDRLPKMPDIFVDVL 1337
                    ..||                                                 |:||
Human  1122 --------DKST-------------------------------------------------VNVL 1129

  Fly  1338 GIVCNLRLQRGGMVQNSEQYELIHRAI 1364
            |.:.::|.||..:||..|||..||.|:
Human  1130 GFLKHIRTQRNYLVQTEEQYIFIHDAL 1156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 100/448 (22%)
PTPc 917..1364 CDD:238006 100/447 (22%)
PTPRGXP_016862450.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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