DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and ptpn2b

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_997819.1 Gene:ptpn2b / 561613 ZFINID:ZDB-GENE-030909-8 Length:393 Species:Danio rerio


Alignment Length:488 Identity:95/488 - (19%)
Similarity:154/488 - (31%) Gaps:227/488 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   887 EQKRIFRDLHKE-FWD---LPLNHQEKPMVF------GSQTKNRYKTILPNENSRVLLESESSEL 941
            ||:  |.|:..| .|.   |.:.:|.....|      .::.:|||:.:.|.::|||.||:..:: 
Zfish     2 EQE--FEDIDSEGRWQNIYLEIRNQSHECAFKVAKYPENRIRNRYRDVSPFDHSRVKLENTEND- 63

  Fly   942 TSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKCYVATQGPLPNTIFEFWLMIYQNTQRYIRR 1006
                                ||||:.:. .:...:.|:.|||||.||...|||||:         
Zfish    64 --------------------YINASLVV-MEEAQRRYILTQGPLRNTCGHFWLMIW--------- 98

  Fly  1007 CVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQKCAVYFPIELNEIFAVAAKCEVFQLSAA 1071
                              :|..:.::||....|...:|||.|:|.:           |..::|  
Zfish    99 ------------------EQKTKAVIMLNRVIEKGSEKCAQYWPTQ-----------EEREMS-- 132

  Fly  1072 ARDYFDRYLTPTFVPDTVVASSDAIDYEISGRHIGVESVKVTLEGDLLEALPAQGSFFLIKNVGI 1136
            .||  .|::.      |:|:                |.||               |::..:.:.:
Zfish   133 FRD--TRFVV------TLVS----------------EDVK---------------SYYTTRVLEL 158

  Fly  1137 VRRNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPDWPDHHSPRDINTLLDTCLHVLNLGKC 1201
            ...|....|::                     ||:.|..|||...|....:.|:....|...|..
Zfish   159 QNANTGETREI---------------------YHFHYTTWPDFGVPESPASFLNFLFKVRESGSL 202

  Fly  1202 ESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQPLPVIHCSAGIGRTGCFTAILNAVRQLRQS 1266
            ..|                               |...|:||||||||:|.|:.:          
Zfish   203 GME-------------------------------QGPAVVHCSAGIGRSGTFSLV---------- 226

  Fly  1267 LAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNTIRHISHILDHRDAEAVKTPPSFDRLPKMPD 1331
                                          .||..      ::|.|     |.|           
Zfish   227 ------------------------------DTCLV------LMDKR-----KDP----------- 239

  Fly  1332 IFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAI 1364
            :.||:..|:.::|..|.|::|..:|....:.|:
Zfish   240 LLVDIKKILLDMRKYRMGLIQTPDQLRFSYMAV 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 85/447 (19%)
PTPc 917..1364 CDD:238006 85/446 (19%)
ptpn2bNP_997819.1 PTPc 1..274 CDD:214550 95/488 (19%)
PTPc 41..274 CDD:238006 86/447 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.