DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTP-ER and ptprga

DIOPT Version :10

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_001316793.1 Gene:ptprga / 561197 ZFINID:ZDB-GENE-101101-4 Length:1414 Species:Danio rerio


Alignment Length:1147 Identity:224/1147 - (19%)
Similarity:356/1147 - (31%) Gaps:424/1147 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 VIHHHLHLQQPASAIHSTSLSRLDSHLSLANQRRTPRRKSPGINTTDWLMYHR------KQNP-- 413
            |:||..........:.....|.:.|:........||    |.....:|:::.|      ||..  
Zfish   224 VVHHEKETFLEPFVLRDLLPSSIGSYYRYIGSLTTP----PCSKVVEWIVFSRPVLLSYKQLEAF 284

  Fly   414 YQV----QPTHCSSTTQ--------SSLDSDASLTPSLGDFELKSACSVDGGSKFGIGASLAPRS 466
            |.:    |..|..|...        .|||:......::.|..|.. .:...|:.:|..||.|..|
Zfish   285 YSIFTTEQQDHVKSVEYLRNNFRPLQSLDNREVFKSAVKDAWLPD-LTYPPGNPYGTEASKACSS 348

  Fly   467 AHKHNQLLHSSSTNLK---TLPEC---------LTLVEFSSSGGGPKESPFKQKSMDLPMPTLQA 519
            |..:..:.|.:.|.|.   :.||.         |....::.:....:|:.||.....|.    ..
Zfish   349 APINMNVQHMNKTALVVRWSRPEITYDPPIISYLISYSWTRNDESYEETYFKGSDQKLE----AV 409

  Fly   520 KTTVSTSSMNLLQRRGSNHSLTLNLHSSCGNLMNSGLSHSNYSLGSILNSKSSCNLDAGT----- 579
            .|.||...:.|.:           :.:.|.|...|..|.      |:|...::..:..||     
Zfish   410 ITPVSPDVLYLFR-----------VQAVCLNDKRSDFSQ------SMLFRANTTRIFEGTRIVKT 457

  Fly   580 -------ASQIRADQLPQSHLLGSSQGSRQGL----------FRRRGSNHSITLKTGHTTTSCGD 627
                   ||.  ||..|.|.  |||..:..||          .....|....|:.:..|:|....
Zfish   458 GMPTVSPASS--ADMAPISS--GSSTWTSSGLPFSFVSMATGIGPSSSGSQATVASVVTSTLLAG 518

  Fly   628 LN--------------------------SMQQLQQQQAMLSAEKYNRL-------NMRTNSTGSG 659
            |.                          |..|...:..:.:||:.:..       |.|::..|..
Zfish   519 LGFSGGVISSFPSSVWPTRPPPSSPAPASTHQSPAKPVVTTAEQASDADTTTATDNDRSDDGGEK 583

  Fly   660 SGSGSNVPTPKRGLLERRGSNQSLTLNMGSILGGAAGTEIQMTDIVQ----------PKVTVCSC 714
            .|.|.:....|.|..|.....:.          |....:.:..|.|:          |...|...
Zfish   584 GGKGEDEDGEKNGEEEEDEDEEK----------GGESKDSRAPDDVEKQTNSSVSKDPPTAVPDS 638

  Fly   715 AAANQAPHQRKFFSTENLNSSKANSQKFFGQVCFGSASDLQPNPQQDSVREDQAIGATCTCAGTV 779
            .|..:...:|...||.....|:.|:|        |...:   |.|..:.||.:.       ...|
Zfish   639 TAKEKGGRRRTENSTAPSRVSEENTQ--------GLGEE---NTQVMASREPEV-------EENV 685

  Fly   780 RNIMTRPLSPQTTSEE----------FKIY-----LASIQ--------------MLQSASNPLNQ 815
            ..::..|.:.:.:|::          |.|:     ::|:.              ::.||...|..
Zfish   686 TAVIETPENTEQSSKDNRGDRNHLPPFSIHTERTVVSSMYPGPAAGRMEWIIPLVVVSALTFLCL 750

  Fly   816 FDLIRLNYVFDHSYQTNRNIIEQPPVLGSNARDVETPTDMVP--PSSEDSELLASYQTVVSRMAQ 878
            ..|:.:...:...:||....:|.     ||:..| .|.:.:|  |..:|.|.:.     |....:
Zfish   751 ILLLAVLVYWRRCFQTAHFYVED-----SNSPRV-VPNESIPVIPIPDDMEAIP-----VKHFIK 804

  Fly   879 PIPELKENEQKRI---FRDLHKEFWDLPL--NHQEKPMVFGSQTKNRYKTILPNENSRVLLESES 938
            .:.||..|.|...   |.::.:...|:.:  .|...|   .::.||||..|:..::|||      
Zfish   805 HVSELYSNNQHGFSDDFEEVQRCTADMKITAEHSNHP---DNKHKNRYINIIAYDHSRV------ 860

  Fly   939 SELTSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKCYVATQGPLPNTIFEFWLMIY-QNTQR 1002
             :|..|.|:..:.|.        ||||||:.|.: ..|.|:|.||||.:|..:||.|:: |||  
Zfish   861 -KLRPLAGKDSKHSD--------YINANYVDGYN-KPKAYIAAQGPLKSTFEDFWRMVWEQNT-- 913

  Fly  1003 YIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQKCAVYFPIELNEIFAVAAKCEVFQ 1067
                                      ..|||:||..|..|:||..|:|.|.:|.:.         
Zfish   914 --------------------------GIIVMITNLVEKGRRKCDQYWPSENSEEYG--------- 943

  Fly  1068 LSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISGRHIGVESVKVTLEGDLLEALPAQGSFFLIK 1132
                                                     ::.|||:...:.|.... ..|.|:
Zfish   944 -----------------------------------------NIVVTLKRTKVMACYTL-RIFTIR 966

  Fly  1133 NVGIVR-----RNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPDWPDHHSPRDINTLLDTC 1192
            |..:.:     ..|....:.||          .||          |..|||...|       :..
Zfish   967 NTKVKKGQKGNTKGRQSERTVL----------QYH----------YTQWPDMGVP-------EYT 1004

  Fly  1193 LHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQPLPVIHCSAGIGRTGCFTAIL 1257
            |.||...:..|                |||..:         :.|: ::|||||:||||.:..|.
Zfish  1005 LPVLTFVRKSS----------------AAQTPD---------MGPM-LVHCSAGVGRTGTYIVID 1043

  Fly  1258 NAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNTIRHISHILDHRDAEAVKTPPS 1322
            :.::||:...|                                                      
Zfish  1044 SMLQQLKDKGA------------------------------------------------------ 1054

  Fly  1323 FDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAI 1364
                       |:|||.:.::|.||..:||..|||..||.|:
Zfish  1055 -----------VNVLGFLKHIRTQRNYLVQTEEQYIFIHDAL 1085

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 PTP_DSP_cys 919..1362 CDD:475123 96/448 (21%)
ptprgaNP_001316793.1 alpha_CARP_receptor_like 71..319 CDD:239396 19/98 (19%)
FN3 348..426 CDD:214495 16/92 (17%)
R-PTPc-G-1 817..1090 CDD:350505 103/485 (21%)
R-PTP-G-2 1174..1378 CDD:350508
Blue background indicates that the domain is not in the aligned region.

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