DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and ptprga

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_001316793.1 Gene:ptprga / 561197 ZFINID:ZDB-GENE-101101-4 Length:1414 Species:Danio rerio


Alignment Length:1147 Identity:224/1147 - (19%)
Similarity:356/1147 - (31%) Gaps:424/1147 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 VIHHHLHLQQPASAIHSTSLSRLDSHLSLANQRRTPRRKSPGINTTDWLMYHR------KQNP-- 413
            |:||..........:.....|.:.|:........||    |.....:|:::.|      ||..  
Zfish   224 VVHHEKETFLEPFVLRDLLPSSIGSYYRYIGSLTTP----PCSKVVEWIVFSRPVLLSYKQLEAF 284

  Fly   414 YQV----QPTHCSSTTQ--------SSLDSDASLTPSLGDFELKSACSVDGGSKFGIGASLAPRS 466
            |.:    |..|..|...        .|||:......::.|..|.. .:...|:.:|..||.|..|
Zfish   285 YSIFTTEQQDHVKSVEYLRNNFRPLQSLDNREVFKSAVKDAWLPD-LTYPPGNPYGTEASKACSS 348

  Fly   467 AHKHNQLLHSSSTNLK---TLPEC---------LTLVEFSSSGGGPKESPFKQKSMDLPMPTLQA 519
            |..:..:.|.:.|.|.   :.||.         |....::.:....:|:.||.....|.    ..
Zfish   349 APINMNVQHMNKTALVVRWSRPEITYDPPIISYLISYSWTRNDESYEETYFKGSDQKLE----AV 409

  Fly   520 KTTVSTSSMNLLQRRGSNHSLTLNLHSSCGNLMNSGLSHSNYSLGSILNSKSSCNLDAGT----- 579
            .|.||...:.|.:           :.:.|.|...|..|.      |:|...::..:..||     
Zfish   410 ITPVSPDVLYLFR-----------VQAVCLNDKRSDFSQ------SMLFRANTTRIFEGTRIVKT 457

  Fly   580 -------ASQIRADQLPQSHLLGSSQGSRQGL----------FRRRGSNHSITLKTGHTTTSCGD 627
                   ||.  ||..|.|.  |||..:..||          .....|....|:.:..|:|....
Zfish   458 GMPTVSPASS--ADMAPISS--GSSTWTSSGLPFSFVSMATGIGPSSSGSQATVASVVTSTLLAG 518

  Fly   628 LN--------------------------SMQQLQQQQAMLSAEKYNRL-------NMRTNSTGSG 659
            |.                          |..|...:..:.:||:.:..       |.|::..|..
Zfish   519 LGFSGGVISSFPSSVWPTRPPPSSPAPASTHQSPAKPVVTTAEQASDADTTTATDNDRSDDGGEK 583

  Fly   660 SGSGSNVPTPKRGLLERRGSNQSLTLNMGSILGGAAGTEIQMTDIVQ----------PKVTVCSC 714
            .|.|.:....|.|..|.....:.          |....:.:..|.|:          |...|...
Zfish   584 GGKGEDEDGEKNGEEEEDEDEEK----------GGESKDSRAPDDVEKQTNSSVSKDPPTAVPDS 638

  Fly   715 AAANQAPHQRKFFSTENLNSSKANSQKFFGQVCFGSASDLQPNPQQDSVREDQAIGATCTCAGTV 779
            .|..:...:|...||.....|:.|:|        |...:   |.|..:.||.:.       ...|
Zfish   639 TAKEKGGRRRTENSTAPSRVSEENTQ--------GLGEE---NTQVMASREPEV-------EENV 685

  Fly   780 RNIMTRPLSPQTTSEE----------FKIY-----LASIQ--------------MLQSASNPLNQ 815
            ..::..|.:.:.:|::          |.|:     ::|:.              ::.||...|..
Zfish   686 TAVIETPENTEQSSKDNRGDRNHLPPFSIHTERTVVSSMYPGPAAGRMEWIIPLVVVSALTFLCL 750

  Fly   816 FDLIRLNYVFDHSYQTNRNIIEQPPVLGSNARDVETPTDMVP--PSSEDSELLASYQTVVSRMAQ 878
            ..|:.:...:...:||....:|.     ||:..| .|.:.:|  |..:|.|.:.     |....:
Zfish   751 ILLLAVLVYWRRCFQTAHFYVED-----SNSPRV-VPNESIPVIPIPDDMEAIP-----VKHFIK 804

  Fly   879 PIPELKENEQKRI---FRDLHKEFWDLPL--NHQEKPMVFGSQTKNRYKTILPNENSRVLLESES 938
            .:.||..|.|...   |.::.:...|:.:  .|...|   .::.||||..|:..::|||      
Zfish   805 HVSELYSNNQHGFSDDFEEVQRCTADMKITAEHSNHP---DNKHKNRYINIIAYDHSRV------ 860

  Fly   939 SELTSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKCYVATQGPLPNTIFEFWLMIY-QNTQR 1002
             :|..|.|:..:.|.        ||||||:.|.: ..|.|:|.||||.:|..:||.|:: |||  
Zfish   861 -KLRPLAGKDSKHSD--------YINANYVDGYN-KPKAYIAAQGPLKSTFEDFWRMVWEQNT-- 913

  Fly  1003 YIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQKCAVYFPIELNEIFAVAAKCEVFQ 1067
                                      ..|||:||..|..|:||..|:|.|.:|.:.         
Zfish   914 --------------------------GIIVMITNLVEKGRRKCDQYWPSENSEEYG--------- 943

  Fly  1068 LSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISGRHIGVESVKVTLEGDLLEALPAQGSFFLIK 1132
                                                     ::.|||:...:.|.... ..|.|:
Zfish   944 -----------------------------------------NIVVTLKRTKVMACYTL-RIFTIR 966

  Fly  1133 NVGIVR-----RNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPDWPDHHSPRDINTLLDTC 1192
            |..:.:     ..|....:.||          .||          |..|||...|       :..
Zfish   967 NTKVKKGQKGNTKGRQSERTVL----------QYH----------YTQWPDMGVP-------EYT 1004

  Fly  1193 LHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQPLPVIHCSAGIGRTGCFTAIL 1257
            |.||...:..|                |||..:         :.|: ::|||||:||||.:..|.
Zfish  1005 LPVLTFVRKSS----------------AAQTPD---------MGPM-LVHCSAGVGRTGTYIVID 1043

  Fly  1258 NAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNTIRHISHILDHRDAEAVKTPPS 1322
            :.::||:...|                                                      
Zfish  1044 SMLQQLKDKGA------------------------------------------------------ 1054

  Fly  1323 FDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAI 1364
                       |:|||.:.::|.||..:||..|||..||.|:
Zfish  1055 -----------VNVLGFLKHIRTQRNYLVQTEEQYIFIHDAL 1085

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 98/453 (22%)
PTPc 917..1364 CDD:238006 98/452 (22%)
ptprgaNP_001316793.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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