DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and ptpn5

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:XP_009301648.1 Gene:ptpn5 / 559524 ZFINID:ZDB-GENE-101028-3 Length:529 Species:Danio rerio


Alignment Length:663 Identity:153/663 - (23%)
Similarity:211/663 - (31%) Gaps:298/663 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   742 FFGQVCFGSAS-----DLQPNPQQDSVREDQAIGATCTCAGTVRNIMTRPLSPQTTSEEFKIYLA 801
            |.|.|..|:.:     .|.|. .|....||:            |..|:|  .|..|..|:     
Zfish   118 FLGVVILGTGTLFCIKTLVPG-NQSCFPEDR------------RQSMSR--QPSFTYSEW----- 162

  Fly   802 SIQMLQSASNPLNQFDLIRLNYVFDHSYQTNRNIIEQPPVL------------GSNARDVETPTD 854
                ..:......:.|.:....|||......   .|..||.            |||   |....|
Zfish   163 ----TDAKQEDFYELDAVPETPVFDCFMDMK---TEADPVTLTVKPVGLQERRGSN---VSLTLD 217

  Fly   855 MVPPSSEDSELLASYQTVVSRMAQPIPELKEN-------EQ--KRIFRD--LHKEFWDLPLNHQE 908
            |..|.:.:     .|..::|...|...|..:|       ||  .|...|  |..||::.|:|..:
Zfish   218 MCTPGTTE-----PYGALLSPREQSTQEYLQNASNLLTPEQLHTRALDDGVLQAEFYETPMNFVD 277

  Fly   909 KPMVF---GSQTKNRYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIKG 970
             |..:   |...||||||||||.:|||.|:::..      |:...|          ||||||:||
Zfish   278 -PKEYSIPGVVRKNRYKTILPNTHSRVCLKAKEE------GDFLST----------YINANYLKG 325

  Fly   971 PDYVSKCYVATQGPLPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLT 1035
            .....|.|:|||||..||:.:||.|::|      .||                     ..|||:|
Zfish   326 YGGKEKAYIATQGPTVNTVGDFWRMVWQ------ERC---------------------PIIVMIT 363

  Fly  1036 NFTEANRQKCAVYFPIELNEIFAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSDAIDYEI 1100
            |..|.| :||..|:|.:       :..||..::                   ||.....|.||.:
Zfish   364 NIEEKN-EKCTEYWPED-------SVTCEGIEI-------------------TVKQVIQADDYSL 401

  Fly  1101 SGRHIGVESVKVTLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSASYHLQK 1165
                                      ..|.:|:.|..|    |:|:                   
Zfish   402 --------------------------RIFTVKSEGEER----SLRQ------------------- 417

  Fly  1166 IYCYHYWYPDWPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQD 1230
                 |||..|||..:|.....||:..                                    |:
Zfish   418 -----YWYTSWPDQKTPDKAPPLLELV------------------------------------QE 441

  Fly  1231 IFNAVQPLP------VIHCSAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHN 1289
            :..|.:..|      ::||||||||||||.|                |.:|.:.|::...     
Zfish   442 VEEARKQAPPNSGPVIVHCSAGIGRTGCFIA----------------TSILCQQLSNEGV----- 485

  Fly  1290 PTDSDSSFTCNTIRHISHILDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNS 1354
                                                        ||:|.....|||.||||:|.:
Zfish   486 --------------------------------------------VDILKTTSQLRLDRGGMIQTA 506

  Fly  1355 EQYELIHRAICLY 1367
            |||:.:|..:.||
Zfish   507 EQYQFVHHVLSLY 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 106/453 (23%)
PTPc 917..1364 CDD:238006 106/452 (23%)
ptpn5XP_009301648.1 PTPc 264..516 CDD:214550 113/477 (24%)
PTPc 289..516 CDD:238006 106/451 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 216 1.000 Inparanoid score I3586
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR19134
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
44.010

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