DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and Ptp99A

DIOPT Version :10

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster


Alignment Length:1256 Identity:244/1256 - (19%)
Similarity:405/1256 - (32%) Gaps:473/1256 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 SEHNSPTILFKDESSTTPGLEASR--LSYSPKLLSSINNLNVSGSPLNIINSAGY---KNGNFFR 231
            :||:....|....:|||....|:|  |.:||::....:|..:..||....:::.|   .|..  .
  Fly    64 NEHSLVDTLVWKTASTTIAQFANRIPLLHSPRIQLLSDNFGLQFSPSLASDTSEYICLVNDR--H 126

  Fly   232 FPE--IDHVVQDAPMDTVCLEEATRRDRSPALAEPPEQQQQKSEGRKNRKNKNNLTIRITDVPIK 294
            .||  :|.:|||.|                   :|||           |....:.|.|..::...
  Fly   127 IPEAIVDLLVQDVP-------------------DPPE-----------RPLLISFTSRSVNLSWA 161

  Fly   295 NSSQPSPLPKPKTPTIKSTKEKARSLDSAANESELSIVVHNITESHGSCDDM--ETGQSQPSTSV 357
            :|..|...|                            |.|.|.|:....|.:  :..:....|:.
  Fly   162 HSQHPRNAP----------------------------VTHFIIETREGEDGIWEQLARIYTKTNA 198

  Fly   358 IHHHLHLQQPASAIHSTSLSRLDSHLSLANQRRTPRRKSPGINTTDWLMYHRKQNPYQVQPTHCS 422
            ..:.:....|.: ::|..|..::. |.:          ||....:.:::..|:....:..||...
  Fly   199 TSYQVTGLTPFT-VYSFRLLAVNK-LGI----------SPPSKESYYIVTLREAPTGKPIPTTAH 251

  Fly   423 STTQSSLDSDASLTPS---LGDFELKSACSVDGGSKFGIGASLAPRSAH---------KHNQLLH 475
            :|:.:|:.......|.   ||:|             .|...:..||...         :.|.:..
  Fly   252 NTSSTSVYISWKAPPPDTILGEF-------------LGYRITYRPRDRDPNDTKEIYIRDNTVES 303

  Fly   476 SSSTNLKTLPEC-LTLVEFSSSGGGPKESPFKQKSMDLPMPTLQAKTTVSTSSMNLLQRRGSNHS 539
            ....||:|..:. :|:..|:..|.||:.:....  .|..:|:.....|:...|.|         |
  Fly   304 HEIQNLQTYTQYKVTVQVFNPEGLGPETTILVM--TDEGVPSKPQNLTILDVSAN---------S 357

  Fly   540 LTLNLHSSCGNLMNSGLS-------HSNYS-LGSILNSKSSC---------NLDAGTASQI---- 583
            :|::.|..  ...|..::       |.|.: :..:.||::|.         ||...|..::    
  Fly   358 ITMSWHPP--KNQNGAIAGYHVFHIHDNQTGVEIVKNSRNSVETLIHFELQNLRPYTDYRVIVKA 420

  Fly   584 --------RADQLPQ-SHLLGSSQGSRQGLFRRRGSNHSITLKTGHTTTSCGDLNSMQQLQQQQA 639
                    .:||:.| :.:.|.|..:...|...  |..|||::...                   
  Fly   421 FTTKNEGEPSDQIAQRTDVGGPSAPAIVNLTCH--SQESITIRWRR------------------- 464

  Fly   640 MLSAEKYNRLN---MRTNSTGSGSGSGSNVPTPKRGLLERRGSNQSLTLNMGSILGGAAGTEIQM 701
              ..|.||.::   ::|...|..:.....:....:. ||.....|:||.|....:..||.|    
  Fly   465 --PYEFYNTIDFYIIKTRLAGQDTHRDIRINASAKE-LETAMILQNLTTNSYYEVKVAAAT---- 522

  Fly   702 TDIVQPKVTVCSCAAANQAPHQRKFFSTENLNSSKANSQKFFGQVCFGSASDLQPNPQQDSVRED 766
            ..::.||..|..            .||...:...:.|.:|            |||..:|.....:
  Fly   523 FSVINPKKIVLG------------KFSESRIIQLQPNCEK------------LQPLLRQSHNDYN 563

  Fly   767 QA--IGATCTCAGTVRNIMTRPLSPQTTSEEFKIYLASIQMLQSASNPLNQFDLIRLNYVFDHSY 829
            .|  :|...:|.|.:..||.             .:|.|.:...:|           ..|:.|..:
  Fly   564 LAVLVGIIFSCFGIILIIMA-------------FFLWSRKCFHAA-----------YYYLDDPPH 604

  Fly   830 QTNRNII--EQPPVLGSNARDVETPTDMVPPSSEDSELLASYQT----VVSRMAQPIPELKENEQ 888
            ..|...:  |.|..:|...|       ...|.:|.::.:||...    ..||..:.|       |
  Fly   605 HPNAPQVDWEVPVKIGDEIR-------AAVPVNEFAKHVASLHADGDIGFSREYEAI-------Q 655

  Fly   889 KRIFRDLHKEFWDLPLNHQEKPMVFGSQTKNRYKTILPNENSRVLLESESSELTSLLGEIKRTSS 953
            .....|      |||..|.:.|   .::.||||..|...::|||.|.....:             
  Fly   656 NECISD------DLPCEHSQHP---ENKRKNRYLNITAYDHSRVHLHPTPGQ------------- 698

  Fly   954 VTASEDLPYINANYIKGPDYVSKCYVATQGPLPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHV 1018
               .::|.|||||:|.|.. ....::.||||||:|...||.||:                     
  Fly   699 ---KKNLDYINANFIDGYQ-KGHAFIGTQGPLPDTFDCFWRMIW--------------------- 738

  Fly  1019 DREQILQQYFQKIVMLTNFTEANRQKCAVYFPIELNEIFAVAAKCEVFQLSAAARDYFDRYLTPT 1083
                  :|....|||:||..|..|:||.:|:|                      :|..:.|    
  Fly   739 ------EQRVAIIVMITNLVERGRRKCDMYWP----------------------KDGVETY---- 771

  Fly  1084 FVPDTVVASSDAIDYEISGRHIGVESVKVTLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLV 1148
                                  ||..||: :|.:::..                    |:||.|.
  Fly   772 ----------------------GVIQVKL-IEEEVMST--------------------YTVRTLQ 793

  Fly  1149 LLYCIRVPQSASYHLQKIYCYHYWYPDWPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRS 1213
            :.: :::.:....:.:|: .|.|.|.:||||.:|       |..|.|||..|..|          
  Fly   794 IKH-LKLKKKKQCNTEKL-VYQYHYTNWPDHGTP-------DHPLPVLNFVKKSS---------- 839

  Fly  1214 ERNAHLAAQRLEIYQQDIFNAVQPLPVIHCSAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKS 1278
                  ||...|         ..|: |:|||||:||||.:..:...::|::|           |:
  Fly   840 ------AANPAE---------AGPI-VVHCSAGVGRTGTYIVLDAMLKQIQQ-----------KN 877

  Fly  1279 LTSSSTEEYHNPTDSDSSFTCNTIRHISHILDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCNL 1343
            :                                                      |:|.|.:.::
  Fly   878 I------------------------------------------------------VNVFGFLRHI 888

  Fly  1344 RLQRGGMVQNSEQYELIHRAI 1364
            |.||..:||..|||..:|.|:
  Fly   889 RAQRNFLVQTEEQYIFLHDAL 909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 PTP_DSP_cys 919..1362 CDD:475123 94/442 (21%)
Ptp99ANP_651691.4 FN3 140..236 CDD:238020 22/165 (13%)
FN3 243..337 CDD:238020 20/108 (19%)
fn3 343..430 CDD:394996 15/97 (15%)
FN3 442..520 CDD:238020 17/101 (17%)
R5-PTPc-1 704..907 CDD:350397 85/399 (21%)
R5-PTP-2 989..1182 CDD:350398
Blue background indicates that the domain is not in the aligned region.

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