DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and Ptp52F

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster


Alignment Length:1099 Identity:200/1099 - (18%)
Similarity:335/1099 - (30%) Gaps:432/1099 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 KSPGINTTDWLMYHRKQNPYQVQPT-----HCSSTTQSSLDSDASLTPSLGDFELKSACSVDGGS 454
            |:.|....|.:.::...|  ...||     .|::|||..       .|....:       |:|.|
  Fly   555 KNAGSEFIDLIAFNADYN--NSCPTIFALFTCNATTQVR-------NPYAERY-------VEGHS 603

  Fly   455 KFGIGASLAPRSAHKHNQLLHSSSTNLKTLPECLTLVEFSSSGGGPKESPFKQKSM-------DL 512
            |.|..|||:|.|.:         :|.:     |..::   .:..||.| |.....|       :.
  Fly   604 KQGFNASLSPLSPY---------ATYV-----CKVIL---YNVAGPSE-PVVDADMHTTTYFPEQ 650

  Fly   513 PMPTLQAKTTVSTSSMNLLQRRGSN------------HSLTLNLHSSCG--------------NL 551
            |...:..|:|||:...|......:|            |..:..:.:.|.              ::
  Fly   651 PESVMLEKSTVSSLLFNWQPPTYTNGPIKYYQAFLMRHEASYFVPADCAIVEQDTKSETKGDPSV 715

  Fly   552 MNSGL-----------SHSNYSLGSILNSKSSCNLDAGTASQIRADQLPQSHLLGSS-------- 597
            ..:||           :.:::.:|..........|.|.:.|..:...|.|..:..::        
  Fly   716 NFTGLAPAVRYMMQVAAQNDFGMGVYTEPVIGITLPAVSDSVTQLTVLTQGPVNNNAVYEANVTI 780

  Fly   598 -------------------QGSRQGL----FRRRGSNHSITLKTGHTTTSCGDLNSMQQLQQQQA 639
                               .|:|...    |.||     :.|.||:.........:..|.|....
  Fly   781 TWKVPCKSNGDIEYFQLAFNGTRNNFAPVSFERR-----VELDTGNKQGRMSYTETEMQPQFDYT 840

  Fly   640 MLSAEKYNRLNMRTNSTGSGSGSGSNVPT-PKRGLLERRGSNQSLTLN---------MGSILGGA 694
            :..:.|...:...::|......|.:.:|| |...|:::..:|...|.|         ...|:..|
  Fly   841 VEVSVKNRDVEQLSSSVPGSWQSPAGLPTIPSDELIKQMRANVEETSNPTKTAIVRLPADIMTSA 905

  Fly   695 AGTEIQMTDIVQPKVTVCSCAAANQAPHQRKFFSTENLNSSKANSQKFFGQVCFGSAS-DLQ--- 755
            :|....|..::..|    :||.   .||.:...|::   ..|..|.:..|....|..| :.|   
  Fly   906 SGDIKWMALMISQK----NCAG---VPHLKYDVSSD---WPKVLSYQEAGADGTGDCSLEYQTTE 960

  Fly   756 ----PNPQQ-----DSVREDQAIGATC---TCAGTVRNIMTRPLSPQTTSEEFKIYLASIQMLQS 808
                |.|.|     ..|..|:.|..|.   .|:...:.....||.|.|   ::.:    :..|.:
  Fly   961 ERWHPEPVQRQRRDGEVTSDEEIVFTIGLDKCSEVQKTYCNGPLLPDT---DYNV----VVRLFT 1018

  Fly   809 ASNPLNQFDLIRLNYVFDHSYQTNRNIIEQPP------VLG--------------SNARDVETPT 853
            ||   ...|...||:....:.:....::....      |||              .:.:.:|.|.
  Fly  1019 AS---GYSDAAVLNFKTKAAIKVTLILVSVCSCLLLAFVLGLTVLWVRKRLAWKRDSGQGIEDPF 1080

  Fly   854 DMVPPSSEDSELLASYQTVVSRMAQPIPELKENEQKRIFRDLHKEFWDLPLNHQEKPMVFGSQTK 918
            ..|        :..::....:.:|:|         :::.|:. ||...:.|.........|.. |
  Fly  1081 GNV--------IAKNFAIFYTEVAKP---------EKLAREF-KEITVVALELSYSASELGCH-K 1126

  Fly   919 NRYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKCYVATQG 983
            |||..|.|.:.:||:|:.:                   :|...||||::|.|... .|.|:||||
  Fly  1127 NRYADIFPYDKNRVILDID-------------------AEGSDYINASFIDGHTR-KKEYIATQG 1171

  Fly   984 PLPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQKCAVY 1048
            |.|.::.:||.|                           |||...:.||.:|.|.|.|..||..|
  Fly  1172 PKPESVMDFWRM---------------------------ILQYNVRVIVQVTQFREGNTIKCHEY 1209

  Fly  1049 FPIELNEIFAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISGRHIGVESVKVT 1113
            :|..:..:.......||.:|       :||                               .::|
  Fly  1210 YPYNVRGLTVTIKSKEVLEL-------YDR-------------------------------TELT 1236

  Fly  1114 LEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPDWPD 1178
            :..|                       .|.:::.|:                    ||::..|||
  Fly  1237 VVHD-----------------------KYGLKEKVI--------------------HYYFKKWPD 1258

  Fly  1179 HHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQPLPVIHC 1243
            |..|.|       .:|::...|                 .:.|::...|        .|: |:||
  Fly  1259 HGVPED-------PMHLIMFVK-----------------KVKAEKRPSY--------SPI-VVHC 1290

  Fly  1244 SAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNTIRHISHI 1308
            |||:||||.|..:                .::.:.|.|.|.                        
  Fly  1291 SAGVGRTGTFIGL----------------DLIMQRLKSESK------------------------ 1315

  Fly  1309 LDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAICLY 1367
                                     :::...|..||.||..|||..:||..::  .|.|
  Fly  1316 -------------------------INIFETVKKLRFQRMKMVQTQQQYTFLY--ACTY 1347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 86/447 (19%)
PTPc 917..1364 CDD:238006 86/446 (19%)
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 12/100 (12%)
PTPc 1100..1345 CDD:214550 91/474 (19%)
PTPc 1125..1348 CDD:238006 88/452 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443580
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19134
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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