DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTP-ER and Ptpn18

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:XP_038939136.1 Gene:Ptpn18 / 301333 RGDID:1311586 Length:459 Species:Rattus norvegicus


Alignment Length:528 Identity:102/528 - (19%)
Similarity:172/528 - (32%) Gaps:254/528 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   873 VSRMAQPIPELKENEQKRIFRD---LHKEFWDLPLNHQEKPMVF--------------GSQTKNR 920
            :||.:..:....|.::.|..|:   |.:||.|:    :.:.:.:              |:..|||
  Rat     1 MSRQSDLVRSFLEQQEARDHREGAILAREFSDI----KARSVAWKTEGVCSTKAGSQQGNSKKNR 61

  Fly   921 YKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKCYVATQGPL 985
            ||.::|.:.:||:|        |||.|.....         |||||:|:|.| .|:.|:||||||
  Rat    62 YKDVVPYDETRVIL--------SLLQEEGHGD---------YINANFIRGTD-GSQAYIATQGPL 108

  Fly   986 PNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLT-NFTEANRQKCAVYF 1049
            |:|:.:||.:::                            ::..|::::. ..||..|:||..|:
  Rat   109 PHTLLDFWRLVW----------------------------EFGVKVILMACQETENGRRKCERYW 145

  Fly  1050 PIELNEI----FAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISGRHIGVESV 1110
            ..|...:    |.:                       |...:|.:.:.           |.:.::
  Rat   146 AQEREPLQAGPFCI-----------------------TLTKETALTAD-----------ITLRTL 176

  Fly  1111 KVTLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSAS-----YHLQKIYCYH 1170
            :||.:                                      :||:...     :.||      
  Rat   177 QVTFQ--------------------------------------KVPKGQKESRPVHQLQ------ 197

  Fly  1171 YWYPDWPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAV 1235
              |..||||..|...:       |:|.:                           :.:......:
  Rat   198 --YMSWPDHGVPSSSD-------HILTM---------------------------VEEARCLQGL 226

  Fly  1236 QPLPV-IHCSAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTC 1299
            .|.|: :|||||.||||...|: :.||||          :||:::                    
  Rat   227 GPGPLCVHCSAGCGRTGVLCAV-DYVRQL----------LLTQTI-------------------- 260

  Fly  1300 NTIRHISHILDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAI 1364
                                ||:|           .:..:|..:|.||...||..|||..::..:
  Rat   261 --------------------PPNF-----------SLFEVVLEMRKQRPAAVQTEEQYRFLYHTV 294

  Fly  1365 CLYLKRTL 1372
            .....|||
  Rat   295 AQLFSRTL 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 89/458 (19%)
PTPc 917..1364 CDD:238006 89/457 (19%)
Ptpn18XP_038939136.1 PTP_DSP_cys 27..298 CDD:421693 93/496 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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