DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and PTPN20

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_001035816.1 Gene:PTPN20 / 26095 HGNCID:23423 Length:420 Species:Homo sapiens


Alignment Length:672 Identity:136/672 - (20%)
Similarity:212/672 - (31%) Gaps:302/672 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   750 SASDLQPNP-----QQDSVREDQAIGATCTCAGTVRNIMTRPLSPQTTSEEFKIYLASIQMLQSA 809
            |..|.:..|     ..||..||.....|...:.......::....:..||:.|:.|.:.      
Human     3 SPRDFRAEPVNDYEGNDSEAEDLNFRETLPSSSQENTPRSKVFENKVNSEKVKLSLRNF------ 61

  Fly   810 SNPLNQFDLIRLNYVFDHSYQTNRNIIEQPPVLGSN----------ARDVETPTD--MVPPSSED 862
              |.|.::                ::.|:|...||:          .||..:..|  ...||...
Human    62 --PHNDYE----------------DVFEEPSESGSDPSMWTARGPFRRDRWSSEDEEAAGPSQAL 108

  Fly   863 SELLASYQTVVS-----RMAQPIPE-------------LKENEQKRIFRDLHKEFWDLPLNHQEK 909
            |.||:..:.:||     ::||..|.             ||..|:|....|:.:||..|.|.:...
Human   109 SPLLSDTRKIVSEGELDQLAQIRPLIFNFHEQTAIKDCLKILEEKTAAYDIMQEFMALELKNLPG 173

  Fly   910 PMVFGSQ----TKNRYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIK- 969
            ....|:|    .||||:.|||.:::||           .||:.|           .||||:||: 
Human   174 EFNSGNQPSNREKNRYRDILPYDSTRV-----------PLGKSK-----------DYINASYIRI 216

  Fly   970 ---GPDYVSKCYVATQGPLPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKI 1031
               |.:|.   |:||||||.:||.:||.|:.:|....                           |
Human   217 VNCGEEYF---YIATQGPLLSTIDDFWQMVLENNSNV---------------------------I 251

  Fly  1032 VMLTNFTEANRQKCAVYFPIELNEIFAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSDAI 1096
            .|:|...|....||..|:||.|.                                          
Human   252 AMITREIEGGIIKCYHYWPISLK------------------------------------------ 274

  Fly  1097 DYEISGRHIGVESVKVTLEG-DLLEALPAQGSFFLIKNVGIVRRN---GYSVRKLVLLYCIRVPQ 1157
                  :.:.::..:|.||. .:|:       :|:|:...:|.::   .:||::|          
Human   275 ------KPLELKHFRVFLENYQILQ-------YFIIRMFQVVEKSTGTSHSVKQL---------- 316

  Fly  1158 SASYHLQKIYCYHYWYPDWPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQ 1222
                          .:..||||.:|...::.:..                   .|..|.:||.. 
Human   317 --------------QFTKWPDHGTPASADSFIKY-------------------IRYARKSHLTG- 347

  Fly  1223 RLEIYQQDIFNAVQPLPVIHCSAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEY 1287
                          |: |:||||||||||.|..:                               
Human   348 --------------PM-VVHCSAGIGRTGVFLCV------------------------------- 366

  Fly  1288 HNPTDSDSSFTCNTIRHISHILDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQ 1352
                  |..| |..:::.|                           .:::.||..:|.||.||||
Human   367 ------DVVF-CAIVKNCS---------------------------FNIMDIVAQMREQRSGMVQ 397

  Fly  1353 NSEQYELIHRAICLYLKRTLAL 1374
            ..|||...:..:...|::.|.|
Human   398 TKEQYHFCYDIVLEVLRKLLTL 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 92/459 (20%)
PTPc 917..1364 CDD:238006 91/454 (20%)
PTPN20NP_001035816.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47 8/43 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..108 9/39 (23%)
PTPc 159..411 CDD:214550 97/482 (20%)
PTPc 185..411 CDD:238006 91/456 (20%)
Substrate binding. /evidence=ECO:0000250 353..359 5/5 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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