DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and pyp1

DIOPT Version :10

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_594885.1 Gene:pyp1 / 2542677 PomBaseID:SPAC26F1.10C Length:550 Species:Schizosaccharomyces pombe


Alignment Length:644 Identity:126/644 - (19%)
Similarity:211/644 - (32%) Gaps:288/644 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   779 VRNIMTRPLSPQTTSEEFKIYLASIQMLQSASNPLNQFDLIRLNYVFDHSYQTNR--NIIEQPPV 841
            :.|.:|   :.:...|:|:        .:|.|......||       |:|..:.:  ::|:..||
pombe   123 IANYVT---NAEVIGEKFR--------KESYSGDFGILDL-------DYSKVSGKYPSVIDNSPV 169

  Fly   842 ---LGS--NARD----VETPTDMVPPSSEDSELLASYQTV-------VSRMAQPIPELKENEQKR 890
               ||:  :||.    ....|..:..|||.|:..:.....       ::....|:||.|:|:...
pombe   170 KSKLGALPSARPRLSYSAAQTAPISLSSEGSDYFSRPPPTPNVAGLSLNNFFCPLPENKDNKSSP 234

  Fly   891 I---------------------FRDLHKEFWDL-PLNHQE--------------KPMVFGSQTKN 919
            .                     ...|:::|..| .|.||.              ..:...|..||
pombe   235 FGSATVQTPCLHSVPDAFTNPDVATLYQKFLRLQSLEHQRLVSCSDRNSQWSTVDSLSNTSYKKN 299

  Fly   920 RYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKCYVATQGP 984
            ||..|:|...:||              .:||||    ..:|.||||::||..   :..|:|.||.
pombe   300 RYTDIVPYNCTRV--------------HLKRTS----PSELDYINASFIKTE---TSNYIACQGS 343

  Fly   985 LPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQKCAVYF 1049
            :..:|.:||.|::.|.:.                         ...||||.:..||.|:.|..|:
pombe   344 ISRSISDFWHMVWDNVEN-------------------------IGTIVMLGSLFEAGREMCTAYW 383

  Fly  1050 PIELNEIFAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISG----RHIGVESV 1110
            |                                         |:...|.::.|    :.|..|:|
pombe   384 P-----------------------------------------SNGIGDKQVYGDYCVKQISEENV 407

  Fly  1111 KVTLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPD 1175
                          ..|.|:::...|...|..||:|:                     :||.||:
pombe   408 --------------DNSRFILRKFEIQNANFPSVKKV---------------------HHYQYPN 437

  Fly  1176 WPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQPLPV 1240
            |.|.:||.::.::::...:|                   .|:|.:..                .:
pombe   438 WSDCNSPENVKSMVEFLKYV-------------------NNSHGSGN----------------TI 467

  Fly  1241 IHCSAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNTIRHI 1305
            :|||||:||||.| .:|:.:.:..:|   .|:|.              ||:.:|||         
pombe   468 VHCSAGVGRTGTF-IVLDTILRFPES---KLSGF--------------NPSVADSS--------- 505

  Fly  1306 SHILDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAI 1364
                                     |:   |..:|.::|.||..|||...|::.::..|
pombe   506 -------------------------DV---VFQLVDHIRKQRMKMVQTFTQFKYVYDLI 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 PTP_DSP_cys 919..1362 CDD:475123 90/446 (20%)
pyp1NP_594885.1 RHOD 41..161 CDD:444705 10/55 (18%)
PTPc 271..536 CDD:214550 94/476 (20%)

Return to query results.
Submit another query.