DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and pyp1

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_594885.1 Gene:pyp1 / 2542677 PomBaseID:SPAC26F1.10c Length:550 Species:Schizosaccharomyces pombe


Alignment Length:644 Identity:126/644 - (19%)
Similarity:211/644 - (32%) Gaps:288/644 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   779 VRNIMTRPLSPQTTSEEFKIYLASIQMLQSASNPLNQFDLIRLNYVFDHSYQTNR--NIIEQPPV 841
            :.|.:|   :.:...|:|:        .:|.|......||       |:|..:.:  ::|:..||
pombe   123 IANYVT---NAEVIGEKFR--------KESYSGDFGILDL-------DYSKVSGKYPSVIDNSPV 169

  Fly   842 ---LGS--NARD----VETPTDMVPPSSEDSELLASYQTV-------VSRMAQPIPELKENEQKR 890
               ||:  :||.    ....|..:..|||.|:..:.....       ::....|:||.|:|:...
pombe   170 KSKLGALPSARPRLSYSAAQTAPISLSSEGSDYFSRPPPTPNVAGLSLNNFFCPLPENKDNKSSP 234

  Fly   891 I---------------------FRDLHKEFWDL-PLNHQE--------------KPMVFGSQTKN 919
            .                     ...|:::|..| .|.||.              ..:...|..||
pombe   235 FGSATVQTPCLHSVPDAFTNPDVATLYQKFLRLQSLEHQRLVSCSDRNSQWSTVDSLSNTSYKKN 299

  Fly   920 RYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKCYVATQGP 984
            ||..|:|...:||              .:||||    ..:|.||||::||..   :..|:|.||.
pombe   300 RYTDIVPYNCTRV--------------HLKRTS----PSELDYINASFIKTE---TSNYIACQGS 343

  Fly   985 LPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQKCAVYF 1049
            :..:|.:||.|::.|.:.                         ...||||.:..||.|:.|..|:
pombe   344 ISRSISDFWHMVWDNVEN-------------------------IGTIVMLGSLFEAGREMCTAYW 383

  Fly  1050 PIELNEIFAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISG----RHIGVESV 1110
            |                                         |:...|.::.|    :.|..|:|
pombe   384 P-----------------------------------------SNGIGDKQVYGDYCVKQISEENV 407

  Fly  1111 KVTLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPD 1175
                          ..|.|:::...|...|..||:|:                     :||.||:
pombe   408 --------------DNSRFILRKFEIQNANFPSVKKV---------------------HHYQYPN 437

  Fly  1176 WPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQPLPV 1240
            |.|.:||.::.::::...:|                   .|:|.:..                .:
pombe   438 WSDCNSPENVKSMVEFLKYV-------------------NNSHGSGN----------------TI 467

  Fly  1241 IHCSAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNTIRHI 1305
            :|||||:||||.| .:|:.:.:..:|   .|:|.              ||:.:|||         
pombe   468 VHCSAGVGRTGTF-IVLDTILRFPES---KLSGF--------------NPSVADSS--------- 505

  Fly  1306 SHILDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAI 1364
                                     |:   |..:|.::|.||..|||...|::.::..|
pombe   506 -------------------------DV---VFQLVDHIRKQRMKMVQTFTQFKYVYDLI 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 91/451 (20%)
PTPc 917..1364 CDD:238006 91/450 (20%)
pyp1NP_594885.1 RHOD 41..161 CDD:294087 10/55 (18%)
COG5599 244..548 CDD:227886 99/505 (20%)
PTPc 297..536 CDD:238006 91/450 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19134
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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