DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTP-ER and Ptpn1

DIOPT Version :10

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_036769.1 Gene:Ptpn1 / 24697 RGDID:61965 Length:432 Species:Rattus norvegicus


Alignment Length:493 Identity:99/493 - (20%)
Similarity:154/493 - (31%) Gaps:235/493 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   884 KENEQ-------KRIFRDLHKEFWDLPLNHQEKPMVFGSQTKNRYKTILPNENSRVLLESESSEL 941
            ||.||       ..|::|:..|..|.|....:.|.   ::.:|||:.:.|.::||:.|..|.:: 
  Rat     5 KEFEQIDKAGNWAAIYQDIRHEASDFPCRIAKLPK---NKNRNRYRDVSPFDHSRIKLHQEDND- 65

  Fly   942 TSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKCYVATQGPLPNTIFEFWLMIYQNTQRYIRR 1006
                                ||||:.|| .:...:.|:.||||||||...||.|:::...|    
  Rat    66 --------------------YINASLIK-MEEAQRSYILTQGPLPNTCGHFWEMVWEQKSR---- 105

  Fly  1007 CVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQKCAVYFP-IELNEIFAVAAKCEVFQLSA 1070
                                   .:|||....|....|||.|:| .|..|:              
  Rat   106 -----------------------GVVMLNRIMEKGSLKCAQYWPQKEEKEM-------------- 133

  Fly  1071 AARDYFDRYLTPTFVPDTVVASSDAIDYEISGRHIGVESVKVTLEGDLLEALPAQGSFFLIKNVG 1135
                .||         ||                    ::|:||..:.:::.             
  Rat   134 ----VFD---------DT--------------------NLKLTLISEDVKSY------------- 152

  Fly  1136 IVRRNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPDWPDHHSPRDINTLLDTCLHVLNLGK 1200
                  |:||:|.|      ...|:...::|  .|:.|..|||...|....:.|:....|...|.
  Rat   153 ------YTVRQLEL------ENLATQEAREI--LHFHYTTWPDFGVPESPASFLNFLFKVRESGS 203

  Fly  1201 CESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQPLPVIHCSAGIGRTGCF----TAILNAVR 1261
            ...|..                              |: |:||||||||:|.|    |.:|    
  Rat   204 LSPEHG------------------------------PI-VVHCSAGIGRSGTFCLADTCLL---- 233

  Fly  1262 QLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNTIRHISHILDHRDAEAVKTPPSFDRL 1326
                                                          ::|.|     |.|.|    
  Rat   234 ----------------------------------------------LMDKR-----KDPSS---- 243

  Fly  1327 PKMPDIFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAI 1364
                   ||:..::..:|..|.|::|.::|....:.|:
  Rat   244 -------VDIKKVLLEMRRFRMGLIQTADQLRFSYLAV 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 PTP_DSP_cys 919..1362 CDD:475123 88/447 (20%)
Ptpn1NP_036769.1 PTPc-N1 16..292 CDD:350456 95/482 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..322
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..402
Blue background indicates that the domain is not in the aligned region.

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