DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and Ptpn22

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_033005.1 Gene:Ptpn22 / 19260 MGIID:107170 Length:802 Species:Mus musculus


Alignment Length:515 Identity:111/515 - (21%)
Similarity:158/515 - (30%) Gaps:255/515 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly   887 EQKRIFRDLHKEFWDLPLNHQEKPMVFGSQ----------------------------TKNRYKT 923
            :|:.|.:.|.||.....||.:|    |.|:                            .|||||.
Mouse     2 DQREILQQLLKEAQKKKLNSEE----FASEFLKLKRQSTKYKADKIYPTTVAQRPKNIKKNRYKD 62

  Fly   924 ILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKCYVATQGPLPNT 988
            |||.::|.|.|                 |.:|:.||..||||::|||. |..|.|:||||||..|
Mouse    63 ILPYDHSLVEL-----------------SLLTSDEDSSYINASFIKGV-YGPKAYIATQGPLSTT 109

  Fly   989 IFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQKCAVYF--PI 1051
            :.:||.||::                      .:||     .|||.....|..::||..|:  |.
Mouse   110 LLDFWRMIWE----------------------YRIL-----VIVMACMEFEMGKKKCERYWAEPG 147

  Fly  1052 ELNEIFAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISGRHIGVESVKVTLEG 1116
            |....|.      .|.:|..|..                                          
Mouse   148 ETQLQFG------PFSISCEAEK------------------------------------------ 164

  Fly  1117 DLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPDWPDHHS 1181
                                 :::.|.:|.|          .|.::.:....|.:.|.:||||..
Mouse   165 ---------------------KKSDYKIRTL----------KAKFNNETRIIYQFHYKNWPDHDV 198

  Fly  1182 PRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQPLPV-IHCSA 1245
            |..|:.:|..               |:|              :..||:|     ..:|: |||||
Mouse   199 PSSIDPILQL---------------IWD--------------MRCYQED-----DCVPICIHCSA 229

  Fly  1246 GIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNTIRHISHILD 1310
            |.||||...|:             ..|.||.|.                                
Mouse   230 GCGRTGVICAV-------------DYTWMLLKD-------------------------------- 249

  Fly  1311 HRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAICLYLKR 1370
                         ..:||...:|    .::..:|.||..:||..|||||::.|:....||
Mouse   250 -------------GIIPKNFSVF----NLIQEMRTQRPSLVQTQEQYELVYSAVLELFKR 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 98/478 (21%)
PTPc 917..1364 CDD:238006 98/449 (22%)
Ptpn22NP_033005.1 PTPc-N22 57..290 CDD:350450 99/452 (22%)
Substrate binding. /evidence=ECO:0000250 227..233 4/5 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 330..358
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 536..564
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 597..619
Interaction with CSK. /evidence=ECO:0000269|PubMed:8890164 613..621
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 653..695
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 713..802
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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