DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and sdf-9

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_508013.2 Gene:sdf-9 / 189901 WormBaseID:WBGene00004748 Length:345 Species:Caenorhabditis elegans


Alignment Length:385 Identity:74/385 - (19%)
Similarity:127/385 - (32%) Gaps:118/385 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   895 LHKEFWDLPLNHQEKPMVFGSQTKNRYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASED 959
            :||...:.||..:.......:..:||...|:|.....|.|                |.|:...:.
 Worm    11 VHKLDDNQPLLSERVTARLEAVNRNRVVKIVPQHRYNVRL----------------TPSMLNRDG 59

  Fly   960 LPYINANYIKGPDYVSKCYVATQGPLPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQIL 1024
              ||||:.::..| |.:.|:.|..|..:.:|.||.|:.:.....|.:..|.......|.|:    
 Worm    60 --YINASLMEFSD-VGQKYILTGIPSEDKVFAFWQMVLEQRSPTIIQFADNVEEKLEHYDK---- 117

  Fly  1025 QQYF----------------------QKIVMLTNF--TEANRQKCAVYF----------PIELNE 1055
              ||                      |......||  .:.|.....::|          || :.:
 Worm   118 --YFPDKGDVWSYGHLQVERKSYAIHQGNFHTRNFILRKGNETHRVLHFTVFGWTETTTPI-MQD 179

  Fly  1056 IFAV-------AAKCEVFQLSAAARDYFDRYL--TPTFVPDTVVASSDAIDYEISGRHIGVESVK 1111
            ..|:       .|...:...||..|....||:  .|:|.|  ::.|:..     |.|        
 Worm   180 FLALRKVMKDTGALNMINPASALFRSTMRRYIHTPPSFAP--IIQSARG-----SSR-------- 229

  Fly  1112 VTLEGDLLEALPAQGSF----FLIKNVGIVRRNGYSVRKLVL------LYCIRVPQSASYHLQKI 1166
                         .|:|    .||:.:...:.|.|||..|::      ::|:.|....|:..:.:
 Worm   230 -------------AGAFVVIDLLIRMIDGKKTNLYSVEDLIVKCKHMRIHCVPVALHHSFIYEAV 281

  Fly  1167 YCYHY-WYPDWPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTR------SERNAHL 1219
            ..|.. ..|.:.|...|  :....::|.  :.....:.|.:.:.:|:      |.||..|
 Worm   282 LDYLLRRNPRFQDFKEP--LIAYSESCF--VKWSSMDKEIEKFINTKTWFLNESSRNKFL 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 70/364 (19%)
PTPc 917..1364 CDD:238006 70/363 (19%)
sdf-9NP_508013.2 PTPc 7..283 CDD:214550 63/325 (19%)
PTPc 34..283 CDD:304379 59/302 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.