DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTP-ER and Y39A3A.4

DIOPT Version :10

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_001370800.1 Gene:Y39A3A.4 / 189720 WormBaseID:WBGene00021435 Length:265 Species:Caenorhabditis elegans


Alignment Length:420 Identity:84/420 - (20%)
Similarity:131/420 - (31%) Gaps:191/420 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   843 GSNARDVETPTDMVPPSSEDSELLASYQTVVSRMAQPIPELKENEQKRIFRDLHKEFWDLPLNHQ 907
            |.|.:||        ..||..|....|...:........:|..:...:.:|.|..:        |
 Worm    15 GENNKDV--------TGSETEEDHLQYLKALENFIFSTEKLGIDGLVKQYRKLDAK--------Q 63

  Fly   908 EKPMVFGSQT----KNRYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYI 968
            :..:.:.:.|    ||||..::..:||||.|:.:.|.    .|:              ||:|||:
 Worm    64 DPSLTYDAYTKYMHKNRYCDVVCLDNSRVKLKIDKSR----HGD--------------YIHANYV 110

  Fly   969 KGPDYVSKCYVATQGPLPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKI-- 1031
            | .:|:...::.:||||.:||.:||.||:|.....|......|....|         :|:..:  
 Worm   111 K-TNYLRSTFICSQGPLQHTIIDFWRMIFQERAESILLLCKVGREGRP---------RYWPSLGV 165

  Fly  1032 ------VMLTNFTEANRQKCAVYFPIELNEIFAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVV 1090
                  :.:|||:|::.:     |.|           |.               |..|||||   
 Worm   166 TETYGCIRVTNFSESSEE-----FEI-----------CN---------------LAVTFVPD--- 196

  Fly  1091 ASSDAIDYEISGRHIGVESVKVTLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRV 1155
                         ::.|:.....|||               ..|.:::                 
 Worm   197 -------------NVPVDEQPANLEG---------------LRVSLIK----------------- 216

  Fly  1156 PQSASYHLQKIYCYHYWYPDWPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLA 1220
                             :|:|||...|.:               ||                |..
 Worm   217 -----------------WPNWPDCGVPDE---------------KC----------------HTV 233

  Fly  1221 AQRLEIYQQDIFNAVQPLP-VIHCSAGIGR 1249
            .|||       ...|:..| |:|||||..|
 Worm   234 PQRL-------LAQVRHGPCVVHCSAGKDR 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 PTP_DSP_cys 919..1362 CDD:475123 70/340 (21%)
Y39A3A.4NP_001370800.1 PTPc 51..>256 CDD:214550 74/374 (20%)

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