DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTP-ER and VW02B12L.2

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_496437.1 Gene:VW02B12L.2 / 189071 WormBaseID:WBGene00012155 Length:122 Species:Caenorhabditis elegans


Alignment Length:41 Identity:11/41 - (26%)
Similarity:22/41 - (53%) Gaps:4/41 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  1330 PDIFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAICLYLKR 1370
            |:||    .|:..::.||.|.:::..||..::..:..|:.|
 Worm    46 PNIF----EIMKTIKQQRPGAIESFPQYSGVYAIVLDYISR 82

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 9/33 (27%)
PTPc 917..1364 CDD:238006 9/33 (27%)
VW02B12L.2NP_496437.1 PTPc_motif <1..78 CDD:214649 9/35 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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