DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and M05B5.1

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_492030.1 Gene:M05B5.1 / 187450 WormBaseID:WBGene00010869 Length:445 Species:Caenorhabditis elegans


Alignment Length:596 Identity:115/596 - (19%)
Similarity:177/596 - (29%) Gaps:270/596 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   846 ARDVETPTDMVPPSSEDSELLASYQTVVSRMAQPIPELKENEQKRIFRD--------LHKE---- 898
            |.|.:.||.. |.|.|.|:             :.:.:.|..|::|..:|        ..||    
 Worm    21 AEDEQEPTQQ-PTSKEMSK-------------EAMKKGKSKEKERASKDKMSASGEKAEKEKDLK 71

  Fly   899 ----------------------FWDLPL-NHQEKPMVFG----SQTKNRYKTILPNENSRVLLES 936
                                  ::|..| |:......|.    :..|||.|.:...:.:||:|.:
 Worm    72 FVAATKGLCKYILDMKEASLNTYFDANLANYSPSKCTFNEWEKNVNKNRTKDVKLIDATRVVLTN 136

  Fly   937 ESSELTSLLGEIKRTSSVTASEDLP-YINANYIKGPDYVSKCYVATQGPLPNTIFEFWLMIYQNT 1000
            ...            |.:..::|:. ||||::|:. |..|..|:.||.|||:||.:||.|:|   
 Worm   137 PEK------------SKMGPADDVEGYINASHIRF-DNASTDYILTQYPLPSTIRDFWKMVY--- 185

  Fly  1001 QRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQKCAVYFPIELNEIFAVAAKCEV 1065
                                             :|..|    |...::.||:...|         
 Worm   186 ---------------------------------VTKVT----QVITIFEPIKDEAI--------- 204

  Fly  1066 FQLSAAARDYFDRYLTPTF-VPDTVVASSDAI----DYEISGR-HIGVESVK------------- 1111
                    :.|..:..|.. ||....|||..|    |.:...| .|.::|::             
 Worm   205 --------EEFANFPAPASPVPPPPTASSKDIGSSPDQQPREREQIEIKSIRCDNHLHQSFFPLS 261

  Fly  1112 ----VTLEGDLLEALPAQGSFFLIKNVGIVRR-----NGYSVRKLVLLYCIRVPQSASYHLQKIY 1167
                :.|||.|:..          :.|.:.:|     |.|:| ::|...|    ..|::  .|:|
 Worm   262 TDHYLNLEGWLINT----------RAVEVDQRCKNWMNKYTV-EVVADGC----SEATF--AKVY 309

  Fly  1168 -CYHYWYPDWPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDI 1231
             |     ..||....|.|:..:                              ||..|..:.:...
 Worm   310 NC-----TTWPWKSYPDDVKKV------------------------------LALVRAPVKESSP 339

  Fly  1232 FNAVQPLPVIHCSAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSS 1296
            ....||..::.|..|:.|                    |.|.:||..:                 
 Worm   340 TVGKQPPVIVMCDLGLDR--------------------SATVVLTSII----------------- 367

  Fly  1297 FTCNTIRHISHILDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNSEQYELIH 1361
                    |..:||.      |||...|...||.|              ||.|:...|..:....
 Worm   368 --------IEQVLDG------KTPDCDDLFRKMRD--------------QRAGVFTMSIFFTYAI 404

  Fly  1362 RAICLYLKRTL 1372
            ||...|||..|
 Worm   405 RAALFYLKLKL 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 92/477 (19%)
PTPc 917..1364 CDD:238006 92/476 (19%)
M05B5.1NP_492030.1 RR_TM4-6 <9..>78 CDD:283990 14/70 (20%)
PTPc 91..409 CDD:214550 97/504 (19%)
PTPc 118..392 CDD:304379 89/460 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 47 1.000 Domainoid score I8111
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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