DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTP-ER and F47B3.2

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_491277.1 Gene:F47B3.2 / 185885 WormBaseID:WBGene00018526 Length:130 Species:Caenorhabditis elegans


Alignment Length:136 Identity:30/136 - (22%)
Similarity:38/136 - (27%) Gaps:80/136 - (58%)


- Green bases have known domain annotations that are detailed below.


  Fly  1240 VIHCSAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNTIRH 1304
            |:|||||:||:|                                                 ||..
 Worm    18 VVHCSAGVGRSG-------------------------------------------------TIVG 33

  Fly  1305 ISHILDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVC--------NLRLQRGGMVQNSEQYELIH 1361
            ||.|:|                 ||      :.||.|        .:|.||...:|...||..||
 Worm    34 ISLIMD-----------------KM------IQGINCKDMKKLVEEIRNQRHYAIQTEAQYMYIH 75

  Fly  1362 RAICLY 1367
            |.:..|
 Worm    76 RVLLEY 81

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 29/131 (22%)
PTPc 917..1364 CDD:238006 29/131 (22%)
F47B3.2NP_491277.1 PTPc_motif <4..80 CDD:214649 29/133 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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